prot_P-fluviatile_contig62.12932.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig62.12932.1
Unique Nameprot_P-fluviatile_contig62.12932.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length145
Homology
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: D7G0E5_ECTSI (Nuclear transport factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 6.150e-48
Identity = 78/90 (86.67%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MSGEEVAKAF+ HFYSKFANNGA LDQLGALYQP SMLTIEGNQVVGA+NIVAKYK LGGNLQFQPDTLDVQM T+TSAL+AV+TGKL++
Sbjct:    1 MSGEEVAKAFLTHFYSKFANNGAQLDQLGALYQPTSMLTIEGNQVVGATNIVAKYKDLGGNLQFQPDTLDVQMGTTTSALLAVVTGKLKI 90          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A7S0BUK2_9STRA (Nuclear transport factor 2 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BUK2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.010e-19
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EEVAKAFV HFY+ F  N   +D L  LYQP+SMLT EGNQV+G+  I+ K K++G  +  Q  +LDVQ S S S++I  +TG + +
Sbjct:    1 MSAEEVAKAFVQHFYNAFDTN---VDSLSGLYQPSSMLTFEGNQVLGSEAIIGKLKSVG-KVNHQVKSLDVQPSNSASSIICFVTGIISI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A6U3TR09_9STRA (Nuclear transport factor 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TR09_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.300e-17
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EEVAKAFV HFY+ F  N   +D L  LY P SMLT EGNQV G   I+ K K++G  ++ +  ++DVQ S++ SA+I  +TG +R+
Sbjct:    1 MSAEEVAKAFVQHFYNAFDTN---VDGLAGLYSPQSMLTFEGNQVGGKDAIMGKLKSIG-TVKHEIKSMDVQPSSNQSAIIIFVTGSIRI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: B8C3C1_THAPS (Nuclear transport factor 2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C1_THAPS)

HSP 1 Score: 77.4 bits (189), Expect = 1.410e-15
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EEVAKAFVAHFY  F      +D L  LY P+SMLT EG QV G+  I+AK + +G  ++ Q  T D+Q S   +A++  +TG +++
Sbjct:    1 MSAEEVAKAFVAHFYQAFDTG---VDGLAGLYSPSSMLTFEGQQVQGSEAIIAKLRGVG-QVKHQVKTTDIQPSNDPNAIVIFVTGAIQI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A7S1FRI8_9STRA (Nuclear transport factor 2 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRI8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.960e-15
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS +EVAKAFVAHFY+ F   G + DQL +LYQP SMLT EG Q+ G   I+AK+K +G  ++     +D Q S + +A++  +TG +++
Sbjct:    1 MSADEVAKAFVAHFYNTFDVAGGV-DQLRSLYQPTSMLTFEGQQMQGPDAILAKFKGVG-EVKHTITNVDCQPSNNPNAILIFVTGSVKI 88          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A7S3L787_9STRA (Nuclear transport factor 2 (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L787_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.070e-15
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EEVAKAFV HFY  +A+N A   QL +LY P SMLT EG Q +G+  I+ K  ++G  +Q    ++DVQ S +  A+I  +TG +R+
Sbjct:    2 MSAEEVAKAFVQHFYGAYASNPA---QLASLYSPNSMLTFEGQQHMGSEAIIGKLTSVG-KVQHDVKSMDVQPSQNPQAMIIFVTGTVRI 87          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: B7G8V7_PHATC (Nuclear transport factor 2 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8V7_PHATC)

HSP 1 Score: 73.9 bits (180), Expect = 3.140e-14
Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EE+A+AFV HFY+ F  N   +D L +L+QP+SM++ EG Q  G  NI+ K K  G  +Q    + DVQ S++ +A++  +TG +++
Sbjct:    1 MSAEEIAQAFVGHFYNSFDTN---VDSLASLFQPSSMMSFEGQQFQGPENIINKLKGTG-QVQHTVKSTDVQPSSNPNAILIFVTGSIKI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A7S1UZF9_9STRA (Nuclear transport factor 2 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZF9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.470e-13
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS +E+AKAFV H+Y  F++N   +  L +L+ P SM+T EG Q+ GA NIVAK +++G  +Q    + DVQ S   +A++  +TG +++
Sbjct:    1 MSADEIAKAFVNHYYQTFSSN---VGALSSLFTPQSMMTFEGAQLQGADNIVAKLQSIG-QVQHDIKSTDVQPSNDPNAILIFVTGAVKI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A1Z5KEC2_FISSO (Nuclear transport factor 2 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEC2_FISSO)

HSP 1 Score: 71.2 bits (173), Expect = 3.490e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRV 90
            MS EEVA AFV H+Y+ F +N    DQL  L+QP SM+T EG Q  G  +IV K + +G  ++    + DVQ S + SA++  +TG +R+
Sbjct:    1 MSAEEVANAFVNHYYNTFDSNP---DQLMGLFQPNSMMTFEGQQFQGPQSIVGKLRQIG-QVKHDVKSTDVQPSNTESAILIFVTGSIRI 86          
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Match: A0A5D6YGI2_9STRA (Nuclear transport factor 2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGI2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.350e-12
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    1 MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASNIVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRVRE 92
            MS E+VAKAFV H+Y+ F  N A L  L   YQP S ++ EG  V G   I++K + L   +Q     LD+Q ST+ +A+I V+ GKL++ E
Sbjct:    1 MSAEDVAKAFVQHYYTTFDTNRAALVNL---YQPVSTMSWEGAMVTGQQEILSKLQQLPA-VQHDVGNLDIQPSTAPNAMIIVVQGKLKIEE 88          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig62.12932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0E5_ECTSI6.150e-4886.67Nuclear transport factor 2 n=1 Tax=Ectocarpus sili... [more]
A0A7S0BUK2_9STRA7.010e-1951.11Nuclear transport factor 2 n=1 Tax=Proboscia inerm... [more]
A0A6U3TR09_9STRA6.300e-1748.89Nuclear transport factor 2 n=1 Tax=Ditylum brightw... [more]
B8C3C1_THAPS1.410e-1545.56Nuclear transport factor 2 n=1 Tax=Thalassiosira p... [more]
A0A7S1FRI8_9STRA2.960e-1545.56Nuclear transport factor 2 n=1 Tax=Corethron hystr... [more]
A0A7S3L787_9STRA4.070e-1546.67Nuclear transport factor 2 (Fragment) n=1 Tax=Amph... [more]
B7G8V7_PHATC3.140e-1441.11Nuclear transport factor 2 n=3 Tax=Phaeodactylum t... [more]
A0A7S1UZF9_9STRA2.470e-1341.11Nuclear transport factor 2 n=1 Tax=Grammatophora o... [more]
A0A1Z5KEC2_FISSO3.490e-1343.33Nuclear transport factor 2 n=1 Tax=Fistulifera sol... [more]
A0A5D6YGI2_9STRA1.350e-1243.48Nuclear transport factor 2 n=1 Tax=Pythium brassic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002075Nuclear transport factor 2PFAMPF02136NTF2coord: 6..91
e-value: 1.6E-12
score: 48.0
NoneNo IPR availableGENE3D3.10.450.50coord: 2..136
e-value: 6.6E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR12612NUCLEAR TRANSPORT FACTOR 2coord: 4..91
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 6..144
score: 13.465
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 4..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig62contigP-fluviatile_contig62:380656..382807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig62.12932.1mRNA_P-fluviatile_contig62.12932.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig62 378736..385686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig62.12932.1 ID=prot_P-fluviatile_contig62.12932.1|Name=mRNA_P-fluviatile_contig62.12932.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=145bp
MSGEEVAKAFVAHFYSKFANNGAMLDQLGALYQPASMLTIEGNQVVGASN
IVAKYKALGGNLQFQPDTLDVQMSTSTSALIAVITGKLRVRELMVLFARN
WSEHRSGIPISALVRTRPNPRPNFLRTALKSPKDNGKARLWHFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf