prot_P-fluviatile_contig61.12823.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig61.12823.1
Unique Nameprot_P-fluviatile_contig61.12823.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length309
Homology
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: A0A6H5KFS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS5_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 5.350e-81
Identity = 196/304 (64.47%), Postives = 218/304 (71.71%), Query Frame = 0
Query:   23 MDFSGGGDSGSGGLGKAHGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAG--------RDLVAGGTWLGVNRSGRFATVTNIVSTWDTILAAVAEGGWTESAVLASKATAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---------AGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERGRYDGFNLVLADPGGVWLLSNRDEAGITRLPHGFYGVSNATLDSPWPKMLHGKSCVLQILLR 309
            MDFS  G++ +G  G+  G+RGRY+LIVASNRDE L RPTAPIHFW+DA SNLLAG        RDLVAGGTWLGV+RSG+FAT+TN+ STW+++L  VA GGW   A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          AGS                            LA+  AR KARKSRGGLVADFL+G+EDA TYC+RL KER R+ GFNLVL+DP G WLLSNRDEAGITRLPHGFYG+SN TLD PW KMLHGKS VLQ+LLR
Sbjct:    1 MDFSAEGNAAAGN-GEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGEYPKARPRRDLVAGGTWLGVSRSGKFATLTNVFSTWESMLEVVALGGWANKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLGFSTPAGSSSSSSLLGWLYALCAAAGLVTAASVP--LAVAVARIKARKSRGGLVADFLKGDEDAETYCARLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMLHGKSRVLQVLLR 301          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: D8LBN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN3_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 6.070e-78
Identity = 176/281 (62.63%), Postives = 195/281 (69.40%), Query Frame = 0
Query:   23 MDFSGGGDSGSGGLGKAHGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTNIVSTWDTILAAVAEGGWTESAVLASKATAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL--------AGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERGRYDGFNLVLADPGGVWLLSNRDEAGITRLPHGFYGVSNATLDSPWPK 295
            MDFS  G + +G  G+  G+RGRY+LIVASNRDE L RPTAPIHFW+DA SNLLAGRDLVAGGTWLGV+RSG+FAT+TN+ STW+ +L  V  GGW       +      XXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX+        AGS                            LA+  ARAKARKSRGGLVADFL+G+EDA TYCSRL KER RY GFNLVL+DP G WLLSNRDEAGITRLPHGFYG+SN TLD PW K
Sbjct:    1 MDFSAAGKAAAGN-GEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWENVLEDVTLGGWANKVAAVAXXXXXXXXXXXXXXXXXRAGHENGISXXXXXXXXXXXXXXXXXXXXXXXXVSSLGLSRPAGSSLSSSSLGWLYALCAAAGLVTAASVP--LAVAVARAKARKSRGGLVADFLKGDEDAETYCSRLSKERRRYAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAK 278          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: A0A0C2HL38_9DELT (Uncharacterized protein n=2 Tax=Geoalkalibacter ferrihydriticus TaxID=392333 RepID=A0A0C2HL38_9DELT)

HSP 1 Score: 103 bits (258), Expect = 1.390e-22
Identity = 77/261 (29.50%), Postives = 96/261 (36.78%), Query Frame = 0
Query:   48 LIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTNIVSTWDTILAAVAEGGWTESAVLASKATAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERGRYDGFNLVLADPGGVWLLSNRDEAGITRLPHGFYGVSNATLDSPWPKMLHGKSCVLQILL 308
            LI+A+NRDEF  RPTA   FW+D +  +LAGRDL AGGTWLGV R+GR+A VTN+ +  D                                                                                                               R+SRG LV DFLRG      +  +L  E   + GFNL+L      W  SNR+     RL  G YG+SNA LD+PWPK+  G    L+ LL
Sbjct:   16 LILAANRDEFYRRPTAAAEFWDD-DPQILAGRDLQAGGTWLGVTRAGRWAAVTNVRNPQD-----------------------------------------------------------------------------------------------------------MKPGRRSRGRLVRDFLRGTLAPGCFLRKLAPEAASFPGFNLLLGSAAQAWYFSNRNSCAPRRLEEGIYGLSNARLDTPWPKV-RGARADLEALL 167          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: UPI0019D38DEC (NRDE family protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D38DEC)

HSP 1 Score: 98.6 bits (244), Expect = 1.430e-20
Identity = 79/269 (29.37%), Postives = 98/269 (36.43%), Query Frame = 0
Query:   40 HGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTNIVSTWDTILAAVAEGGWTESAVLASKATAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERG-RYDGFNLVLADPGGVWLLSNRDEAGITRLPHGFYGVSNATLDSPWPKMLHGKSCVLQIL 307
            H     Y L++A+NRDEF  RPTA   FW DA+ +LLAGRDL AGGTW+GV R GRFA VTN                                                                                                               A  A A +SRG L   +L G+      C R    RG +Y GFNL+L D   +W  SN       RL  G YG+SNA+L++PWPK+  GKS +  +L
Sbjct:    8 HRAHRDYPLLLAANRDEFHARPTAGAAFW-DAHPDLLAGRDLTAGGTWMGVTRQGRFAAVTNFRDP-----------------------------------------------------------------------------------------------------------ARTAPAPRSRGELPLAWLTGDARDPAACLREIAARGGQYAGFNLLLGDGEALWYYSNAGAGDPVRLEPGIYGLSNASLNTPWPKVTLGKSRMAALL 168          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: A0A7Y5QRE7_9FLAO (NRDE family protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7Y5QRE7_9FLAO)

HSP 1 Score: 93.6 bits (231), Expect = 7.670e-19
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   39 AHGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTN 101
            A+ V  RY LIVA+NRDEFL+RPT P HFWED + ++LAGRDL AGGTWLGV R GRFA VTN
Sbjct:    7 AYKVHPRYPLIVAANRDEFLDRPTRPAHFWED-DPHVLAGRDLQAGGTWLGVTRRGRFAAVTN 68          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: UPI001E612E34 (NRDE family protein n=1 Tax=Bacillus sp. REN16 TaxID=2887296 RepID=UPI001E612E34)

HSP 1 Score: 90.9 bits (224), Expect = 8.900e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:   46 YRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTN 101
            Y+LIVA+NRDEFL+RPTAPIHFWED   NLLAGRDL   GTW+GV ++GRFA +TN
Sbjct:   14 YKLIVAANRDEFLQRPTAPIHFWED-EPNLLAGRDLEKMGTWMGVTKAGRFAAITN 68          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: A0A1G9ZY30_9BACI (Uncharacterized conserved protein, contains NRDE domain n=1 Tax=Bacillus sp. OK048 TaxID=1882761 RepID=A0A1G9ZY30_9BACI)

HSP 1 Score: 90.1 bits (222), Expect = 1.730e-17
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   39 AHGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTN 101
            A+ V  +Y+LIVA+NRDEF +RPTAP HFWED +SN+LAGRDL   GTW+GV + GRFA +TN
Sbjct:    7 AYKVHPKYKLIVAANRDEFYQRPTAPAHFWED-DSNILAGRDLEKMGTWMGVTKKGRFAALTN 68          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: UPI001F2CA522 (NRDE family protein n=1 Tax=Pelomonas sp. P7 TaxID=2906763 RepID=UPI001F2CA522)

HSP 1 Score: 90.1 bits (222), Expect = 2.290e-17
Identity = 77/265 (29.06%), Postives = 103/265 (38.87%), Query Frame = 0
Query:   45 RYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTNIVSTWDTILAAVAEGGWTESAVLASKATAVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERGRYDGFNLVLADPGGV-W-LLSNRDEAGITRLPHGFYGVSNATLDSPWPKMLHGKSCVLQIL 307
            R+ L++A+NRDEF  RP AP+ +W+ A + +LAGRDL AGGTW G+ R+GR A +TNI            E G                                                                                                 RA A  SRG LV D+LR ++DA  + + L      Y+GFNL+ AD     W  +SNR  +   RLP G +G+SNA LD+PWPK L  K+ +   L
Sbjct:   13 RFPLVIAANRDEFFARPAAPMAWWQVAGTEVLAGRDLSAGGTWFGLTRAGRLALLTNI-----------REPG-----------------------------------------------------------------------------------------------RQRADA-PSRGALVVDWLRRDDDATRFAASLAPG---YNGFNLITADLARRDWHWISNRTPSA-QRLPDGIHGLSNAALDTPWPKTLGLKAALASAL 166          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: UPI000C0BCBFA (NRDE family protein n=2 Tax=Fredinandcohnia onubensis TaxID=1571209 RepID=UPI000C0BCBFA)

HSP 1 Score: 89.0 bits (219), Expect = 4.500e-17
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0
Query:   38 KAHGVRGRYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTN 101
            +AH V   Y+LIVA+NRDEFL+RPTAPIHFWED    LLAGRDL   GTW+GV ++GRFA +TN
Sbjct:    9 QAHPV---YKLIVAANRDEFLQRPTAPIHFWED-EPTLLAGRDLEKMGTWMGVTKAGRFAAITN 68          
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Match: A0A523JRB6_9GAMM (NRDE family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523JRB6_9GAMM)

HSP 1 Score: 89.0 bits (219), Expect = 4.750e-17
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   45 RYRLIVASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVTN 101
            RYRL++A+NRDEF ERP+ P H+W+D +  LLAGRDL AGGTWLGVNRSGR A VTN
Sbjct:   13 RYRLVLAANRDEFHERPSQPAHWWQD-HPGLLAGRDLEAGGTWLGVNRSGRLALVTN 68          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig61.12823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS5_9PHAE5.350e-8164.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBN3_ECTSI6.070e-7862.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0C2HL38_9DELT1.390e-2229.50Uncharacterized protein n=2 Tax=Geoalkalibacter fe... [more]
UPI0019D38DEC1.430e-2029.37NRDE family protein n=1 Tax=Parahaliea mediterrane... [more]
A0A7Y5QRE7_9FLAO7.670e-1971.43NRDE family protein n=1 Tax=Flavobacteriales bacte... [more]
UPI001E612E348.900e-1873.21NRDE family protein n=1 Tax=Bacillus sp. REN16 Tax... [more]
A0A1G9ZY30_9BACI1.730e-1765.08Uncharacterized conserved protein, contains NRDE d... [more]
UPI001F2CA5222.290e-1729.06NRDE family protein n=1 Tax=Pelomonas sp. P7 TaxID... [more]
UPI000C0BCBFA4.500e-1767.19NRDE family protein n=2 Tax=Fredinandcohnia onuben... [more]
A0A523JRB6_9GAMM4.750e-1771.93NRDE family protein n=1 Tax=Gammaproteobacteria ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008551Transport and Golgi organisation protein 2PFAMPF05742TANGO2coord: 216..306
e-value: 7.2E-16
score: 59.0
coord: 45..104
e-value: 6.0E-23
score: 82.2
IPR008551Transport and Golgi organisation protein 2PANTHERPTHR17985SER/THR-RICH PROTEIN T10 IN DGCR REGIONcoord: 213..303
IPR008551Transport and Golgi organisation protein 2PANTHERPTHR17985SER/THR-RICH PROTEIN T10 IN DGCR REGIONcoord: 44..114
NoneNo IPR availablePANTHERPTHR17985:SF20coord: 44..114
NoneNo IPR availablePANTHERPTHR17985:SF20coord: 213..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..309
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..188
NoneNo IPR availableTMHMMTMhelixcoord: 191..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig61contigP-fluviatile_contig61:116050..118412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig61.12823.1mRNA_P-fluviatile_contig61.12823.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig61 116050..118412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig61.12823.1 ID=prot_P-fluviatile_contig61.12823.1|Name=mRNA_P-fluviatile_contig61.12823.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=309bp
CITFFYHALGDAAPDGHPPLASMDFSGGGDSGSGGLGKAHGVRGRYRLIV
ASNRDEFLERPTAPIHFWEDANSNLLAGRDLVAGGTWLGVNRSGRFATVT
NIVSTWDTILAAVAEGGWTESAVLASKATAVIATAATAATAATAAALLHR
RHMRDNGSSGAGSEWAAAAAAAASLRLAGSSSLASSASLGWLCALCAAAG
LATAASVGLAILAARAKARKSRGGLVADFLRGEEDAATYCSRLYKERGRY
DGFNLVLADPGGVWLLSNRDEAGITRLPHGFYGVSNATLDSPWPKMLHGK
SCVLQILLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008551TANGO2