prot_P-fluviatile_contig60.12805.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig60.12805.1
Unique Nameprot_P-fluviatile_contig60.12805.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length140
Homology
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.840e-61
Identity = 105/140 (75.00%), Postives = 120/140 (85.71%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL 140
            VGVAVKGDG+RLQRDY V+T GMV+LRSYAR  WVDLPCR+ AGM ATALGKSLSK+P+VRFS WS++ LT  Q+ YACLDAYAAV+LHAEIGK KDPIF  APS++P AGT+VRLYTNNH SCV VG+VQ EE A SL+
Sbjct:  153 VGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLV 292          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.820e-54
Identity = 96/113 (84.96%), Postives = 101/113 (89.38%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTK 113
            VGVAVKGDG RLQRDY+V+TRGMV+LRSYARA WVDLPCR+ AGMTATALGK LSKD A RFS WS+  LTP QIEYACLDAYAAVLLHAEIGKFKDPIF EAPSEVP AGTK
Sbjct:  250 VGVAVKGDGKRLQRDYDVETRGMVDLRSYARACWVDLPCRSLAGMTATALGKYLSKDAAGRFSHWSRPELTPNQIEYACLDAYAAVLLHAEIGKFKDPIFGEAPSEVPAAGTK 362          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.250e-34
Identity = 73/144 (50.69%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATALGKSLSKDPAVRFSAWSKSTLT----PKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL 140
            VGV V  D T L RDY VQ    V+L  YAR  WV+ P  + AGMT++ L K L K+  +R S WS  +LT    P Q++YACLDAYA+VLL  EI K +DPI    P ++P +GT+VRLYTNNHASCV VG++  ++ A   L
Sbjct:  173 VGVNVNLDATYLARDYRVQVANTVDLGVYARQGWVETPSYSLAGMTSSLLRKELPKNAIIRLSRWSGPSLTDKQVPLQVQYACLDAYASVLLCQEIRKLQDPILSPPPKDLP-SGTEVRLYTNNHASCVGVGKMVDDDAAAEAL 315          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.700e-28
Identity = 63/89 (70.79%), Postives = 66/89 (74.16%), Query Frame = 0
Query:   52 KSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL 140
            K L  DPA+             +IEYACLDAYAAVLLH EIG FKDPIF EAPSEVP AGTKVRLYTNNHASCVAVG VQTE+ A SLL
Sbjct:  608 KRLLNDPAIT------------KIEYACLDAYAAVLLHTEIGNFKDPIFSEAPSEVPAAGTKVRLYTNNHASCVAVGHVQTEDEASSLL 684          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.120e-28
Identity = 65/140 (46.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL 140
            VGV +  D T L+RDY ++    V+LR+YAR  WV+ P R+ AGM ++ LG+ L KDP +R S WS S L+  Q                E+ KF+DPIF   P E+   GTKVRLY+NNHASCV VGEVQ ++ A   L
Sbjct:  178 VGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRSSRWS-SPLSDNQ----------------EVAKFQDPIFSPPPVEL-HPGTKVRLYSNNHASCVGVGEVQDDDTAAEAL 299          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A6H5KWT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.390e-26
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   45 MTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIFREAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL 140
            MT+  LG+ L KDP VR S WS + L  KQ++YACLDAYA+VL++ E+ KF+DPI    P E+   GTKVRLY+ NHASCV VGEVQ +E+A   L
Sbjct:    1 MTSHLLGRQLPKDPVVRLSRWS-APLADKQVQYACLDAYASVLVYQEVAKFQDPILSPPPVEL-QPGTKVRLYSKNHASCVGVGEVQDDEIAAEAL 94          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A6H5K9Q9_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q9_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.270e-22
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLH 89
            VGV +  D T L++DY V+    V+LR+ AR +WV+ PCR+ AGMT+  LG+ L KDP VR S WS + L  KQ++YACLDAYA+VL++
Sbjct:  106 VGVNINSDATYLEQDYGVEVANTVDLRTCARQSWVETPCRSLAGMTSHLLGRQLPKDPVVRLSRWS-APLADKQVQYACLDAYASVLVY 193          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A367KBH8_RHIAZ (3'-5' exonuclease domain-containing protein n=3 Tax=Rhizopus TaxID=4842 RepID=A0A367KBH8_RHIAZ)

HSP 1 Score: 65.1 bits (157), Expect = 1.090e-9
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
Query:    2 GVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLP------CRNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGK 94
            GV ++ DG +L RD+ ++T G+V L S+A A+   LP       R+   +TA  L + ++K   VR S W+  +LTPKQI YA LDAYA+  ++  I K
Sbjct:  171 GVNIRMDGLKLHRDFGIKTNGLVELMSFANAS--KLPEVKKYHMRSLRALTAFFLKRRMAKGD-VRISNWAVRSLTPKQISYAALDAYASYQIYQAIKK 266          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A8H7SST8_9FUNG (RBR-type E3 ubiquitin transferase n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SST8_9FUNG)

HSP 1 Score: 63.5 bits (153), Expect = 5.260e-9
Identity = 47/130 (36.15%), Postives = 65/130 (50.00%), Query Frame = 0
Query:    2 GVAVKGDGTRLQRDYEVQTRGMVNLRSYAR-ANWVDLPC---RNPAGMTATALGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDP--------IFREAPSEVPDAGTKVRLYTN 119
            GV +  DG +LQRD+   T G+V LR  A  A    L     R+   +T   L ++++K   VR S W K  LTP QI YA LDAYA+  L+  + K KD         +  E P+ V  A  +V+  +N
Sbjct:  687 GVNIAADGLKLQRDFGFVTNGLVELRDLAEMAKSPKLGISHLRSLRALTGIFLEQNMAKG-KVRLSNWGKPNLTPLQIRYAALDAYASYELYMVLEKLKDTAQKLPVRHLIDEVPNTVKVAKKEVKKESN 815          
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Match: A0A2K3KZQ5_TRIPR (Werner syndrome-like exonuclease-like protein n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KZQ5_TRIPR)

HSP 1 Score: 60.1 bits (144), Expect = 2.980e-8
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    1 VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATA---LGKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAY 83
            VGV +K D  +L RD+ ++    V+LR+ A A  +D    N AG+   A   LGK + K   +  S WS   LT +Q++YAC+DA+
Sbjct:  114 VGVGIKDDVDKLDRDFSLRVANFVDLRTLA-AQTLDDKAMNSAGLKTLAKRVLGKEIEKPKRITLSDWSNFPLTIRQVQYACVDAF 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig60.12805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRJ6_9PHAE1.840e-6175.003'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI3.820e-5484.963'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JYR4_9PHAE1.250e-3450.693'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4M0_9PHAE1.700e-2870.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV1_ECTSI2.120e-2846.43Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5KWT5_9PHAE2.390e-2657.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9Q9_9PHAE3.270e-2252.813'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A367KBH8_RHIAZ1.090e-940.403'-5' exonuclease domain-containing protein n=3 Ta... [more]
A0A8H7SST8_9FUNG5.260e-936.15RBR-type E3 ubiquitin transferase n=1 Tax=Thamnidi... [more]
A0A2K3KZQ5_TRIPR2.980e-838.37Werner syndrome-like exonuclease-like protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..97
e-value: 1.2E-21
score: 78.8
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 1..131
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig60contigP-fluviatile_contig60:866163..866876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig60.12805.1mRNA_P-fluviatile_contig60.12805.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig60 866163..866877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig60.12805.1 ID=prot_P-fluviatile_contig60.12805.1|Name=mRNA_P-fluviatile_contig60.12805.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=140bp
VGVAVKGDGTRLQRDYEVQTRGMVNLRSYARANWVDLPCRNPAGMTATAL
GKSLSKDPAVRFSAWSKSTLTPKQIEYACLDAYAAVLLHAEIGKFKDPIF
REAPSEVPDAGTKVRLYTNNHASCVAVGEVQTEEVACSLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf