prot_P-fluviatile_contig60.12771.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig60.12771.1
Unique Nameprot_P-fluviatile_contig60.12771.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length282
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig60.12771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 86..154
e-value: 2.1E-6
score: 37.3
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 94..153
e-value: 2.0E-9
score: 37.8
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 87..153
score: 12.11
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 71..161
e-value: 8.3E-15
score: 56.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 76..155
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 71..168
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 71..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig60contigP-fluviatile_contig60:287304..305481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig60.12771.1mRNA_P-fluviatile_contig60.12771.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig60 287089..305887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig60.12771.1 ID=prot_P-fluviatile_contig60.12771.1|Name=mRNA_P-fluviatile_contig60.12771.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=282bp
MEGFSVQNSENPEIGHRGWGFNLENIQKPVQDAYLIFGSSRSDRKRFVQH
PTGPVSEMSCPAETEALKMIKSHAARPKPRKKDPNLPKGVIVGFNWFVQE
KTPELRDKKMTHQEINQEIGKLWHKLDEEAKEKYNAKGEEDRTRFCQEYK
QYKPSSGFMYSSPRINLRKATKSLSSRDLEPGTEHAEGKKRTAYAHFAIQ
ETRGIRPSIRVKEEMSKAFSRRWNGRKVGASSNEGSRIPTEERVLYSELL
EAEEQTKHARYMAASQGSNRGHQSSQAVFYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf