prot_P-fluviatile_contig60.12770.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig60.12770.1
Unique Nameprot_P-fluviatile_contig60.12770.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length132
Homology
BLAST of mRNA_P-fluviatile_contig60.12770.1 vs. uniprot
Match: D7G5V4_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V4_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.590e-31
Identity = 69/142 (48.59%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    1 MHGSHVEGALDVGITEVIRNAGRSFLTSTSSALESLSALPDFCGIHESRIFAYDGRRAAILVAMNGTKTFCDVISEGLYDLSVSTEPEGDWRDALQATAAAFI----------AEHGIQQYVR--PPWASVVHVAPRRVRIY 130
            M GS+  G L +G  + IR AG  FL ST  A+E LS + D  GI  SRIFA+DGR AAILV  + T+ FC  IS GLYDL VS EP  DW+D L A A++ I          A  G++      P WASVVHVAP RV ++
Sbjct:    1 MQGSNTNGVLPIGFADSIRKAGCLFLNSTLGAVEGLSEVKDLAGIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVGGMEPLFNALPLWASVVHVAPHRVSVH 142          
BLAST of mRNA_P-fluviatile_contig60.12770.1 vs. uniprot
Match: A0A6H5JSJ1_9PHAE (HMG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ1_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.650e-31
Identity = 70/142 (49.30%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    1 MHGSHVEGALDVGITEVIRNAGRSFLTSTSSALESLSALPDFCGIHESRIFAYDGRRAAILVAMNGTKTFCDVISEGLYDLSVSTEPEGDWRDALQATAAAFI----------AEHGIQQYVR--PPWASVVHVAPRRVRIY 130
            M GS+  G L +GI + IRNAG  FL ST  A+E LS + D   I  SRIFA+DGR AAILV  + T+ FC  IS GLYDL VS EP  DW+D L A A++ I          A  G++   +  P WASVVHVAP RV ++
Sbjct:   64 MQGSNANGVLPIGIADRIRNAGCLFLNSTRGAVEGLSEMKDLAEIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAVSGMEPLFKAVPLWASVVHVAPHRVSVH 205          
BLAST of mRNA_P-fluviatile_contig60.12770.1 vs. uniprot
Match: A0A2Z4MTA2_SACJA (HMG-box containing protein isoform 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MTA2_SACJA)

HSP 1 Score: 102 bits (254), Expect = 4.350e-23
Identity = 63/144 (43.75%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    1 MHGSHVEGALDVGITEVIRNAGRSFLTSTSSALESLSALPDFCGIHESRIFAYDGRRAAILVAMNGTKTFCDVISEGLYDLSVSTEPEGDWRDALQATAAAFI----------AEHGIQQ----YVRPPWASVVHVAPRRVRIY 130
            M GS  +    V + + +RNAG  FL     AL SLSA  D  GI  SRIFAYDG  AAILV     + FC  +S GLYDL VS     DWRDAL AT  + I          A  G+      +  P W+SVVH+AP RV ++
Sbjct:    1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSRVAVH 144          
BLAST of mRNA_P-fluviatile_contig60.12770.1 vs. uniprot
Match: A0A2Z4MT98_SACJA (HMG-box containing protein isoform 2 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MT98_SACJA)

HSP 1 Score: 99.4 bits (246), Expect = 6.260e-23
Identity = 62/140 (44.29%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    1 MHGSHVEGALDVGITEVIRNAGRSFLTSTSSALESLSALPDFCGIHESRIFAYDGRRAAILVAMNGTKTFCDVISEGLYDLSVSTEPEGDWRDALQATAAAFI----------AEHGIQQ----YVRPPWASVVHVAPRR 126
            M GS  +    V + + +RNAG  FL     AL SLSA  D  GI  SRIFAYDG  AAILV     + FC  +S GLYDL VS     DWRDAL AT  + I          A  G+      +  P W+SVVH+AP R
Sbjct:    1 MEGSFRDDGPPVDLFDGVRNAGLLFLDLGCEALASLSAANDLHGIDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSR 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig60.12770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5V4_ECTSI2.590e-3148.59HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JSJ1_9PHAE4.650e-3149.30HMG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A2Z4MTA2_SACJA4.350e-2343.75HMG-box containing protein isoform 1 n=1 Tax=Sacch... [more]
A0A2Z4MT98_SACJA6.260e-2344.29HMG-box containing protein isoform 2 n=1 Tax=Sacch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig60contigP-fluviatile_contig60:284752..287171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig60.12770.1mRNA_P-fluviatile_contig60.12770.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig60 279243..287293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig60.12770.1 ID=prot_P-fluviatile_contig60.12770.1|Name=mRNA_P-fluviatile_contig60.12770.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=132bp
MHGSHVEGALDVGITEVIRNAGRSFLTSTSSALESLSALPDFCGIHESRI
FAYDGRRAAILVAMNGTKTFCDVISEGLYDLSVSTEPEGDWRDALQATAA
AFIAEHGIQQYVRPPWASVVHVAPRRVRIYV*
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