prot_P-fluviatile_contig6.12721.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig6.12721.1
Unique Name	prot_P-fluviatile_contig6.12721.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	246

Homology

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 4.900e-112
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0

Query:    1 MTNRIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEHSGRDSR 167
            MTNRIYIGHLS HTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRE DGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSR+DMK AIR LDDTRLGGKYIRVREE+SGRDSR
Sbjct:    1 MTNRIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVREENSGRDSR 167

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 3.130e-45
Identity = 72/140 (51.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIR 143
            R+Y+G LSS+TR+RDL+R F RYGR+E++D++ GFAF+EF D RDA+DAV +M GR+LDG RI V+  +G R  G +   + +  RI VEGLD  TSWQDLKDFGR+ G ++Y+DV+    +++G++EY  +ED + A++
Sbjct:    6 RVYVGGLSSYTRERDLERVFDRYGRVERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLKDFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A8C0AX14_9AVES (Uncharacterized protein n=1 Tax=Buteo japonicus TaxID=224669 RepID=A0A8C0AX14_9AVES)

HSP 1 Score: 152 bits (385), Expect = 6.080e-43
Identity = 79/170 (46.47%), Postives = 109/170 (64.12%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATR------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEH 161
            R+++GHLSS  R+RD+++ F  YGRI +I ++ GF F+EFED RDA+DA+ E++G+EL   R+ ++  R  R  G +F  R            RTEHRI VE L S  SWQDLKD  R+AG+V Y D   R  R  GVVE+ S  DMK+A+ +LD T L G+ I++ E+H
Sbjct:    5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRG-RFPQRFSYYQSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAH-RNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDH 172

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A6P8RXC7_GEOSA (serine/arginine-rich splicing factor 5-like isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8RXC7_GEOSA)

HSP 1 Score: 153 bits (387), Expect = 3.030e-42
Identity = 84/186 (45.16%), Postives = 116/186 (62.37%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQP-----GRGHRPNGPKFATR-----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEHSGRDSR 167
            R++IG LS H R+RD+++ F  YGRI++I+++ GF F+EFED RDA+DAV E++G+EL   R+ ++      GRG    G +F TR                 RT+HRI VE L S  SWQDLKDF R+AG+V Y D   R  +  GVVE+ S +DMKNA+  LD T L G+ I++ E++  R SR
Sbjct:    5 RVFIGRLSPHARERDVEKFFKGYGRIKEINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARNRRGRGRFGGGGRFPTRFSYQYRSSGSSRYGPPLRTKHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAH-RSNKNEGVVEFASFDDMKNALDTLDGTELNGRKIKLIEDNKKRRSR 189

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: UPI00096B0064 (serine-arginine protein 55-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B0064)

HSP 1 Score: 154 bits (388), Expect = 4.060e-42
Identity = 84/186 (45.16%), Postives = 120/186 (64.52%), Query Frame = 0

Query:    1 MTNRIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGH-------RPNG---------PKFATR-------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEHSG 163
            M  R+++G L+   R+RD+++ F +YGRI+++ ++ GFAF+EF+D RDA+DAV E++G+EL G R+ V+  RG        R NG         P+  +R       RTE+R+ VE L S  SWQDLKD+ RQAG+V Y+D   +Q R  GVVE+ S  DMKNAI +LDDT L G++I +RE+  G
Sbjct:    1 MGTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRGSDQWRGNGGGGGRSYGPPRGRSRDKYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAH-KQRRNEGVVEFASYSDMKNAIEKLDDTDLNGRHIHLREDRRG 185

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: L1JS00_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JS00_GUITC)

HSP 1 Score: 153 bits (386), Expect = 4.160e-42
Identity = 74/157 (47.13%), Postives = 108/157 (68.79%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREE 160
            R+Y+GHLSS  R+RDLD  F R+G+I  I ++ GFAF+E++   DAE AV +MDG  L+G RI+V+  +     GP+  +    +RI  E L  +TSWQDLKDF R+AG+V+Y+DVF  +G + GV+EY +REDM++A+ +LD T L    +R+ +E
Sbjct:    6 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLEGMRILVEFAKETPKRGPRGGS---GYRIYAENLSQNTSWQDLKDFARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTELHRSKVRLVKE 159

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A0Q3MS90_AMAAE (Serine/arginine-rich splicing factor 5-like protein n=3 Tax=Neognathae TaxID=8825 RepID=A0A0Q3MS90_AMAAE)

HSP 1 Score: 150 bits (378), Expect = 7.980e-42
Identity = 79/175 (45.14%), Postives = 108/175 (61.71%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATR-----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEH 161
            R+++GHLSS  R+RD+++ F  YGRI +I  + GF F+EFED RDA+DA+ E++G+EL   R+ ++  R  R  G +F  R                 RTEHRI VE L S  SWQDLKD  R+AG+V Y D   R  R  GVVE+ S  DMK+A+ +LD T L G+ I++ E+H
Sbjct:    5 RVFVGHLSSRARERDVEKFFKGYGRIREIHXKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRG-RFPQRFSYYQSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAH-RNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDH 177

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A8B9V2L9_9AVES (Uncharacterized protein n=2 Tax=Anatidae TaxID=8830 RepID=A0A8B9V2L9_9AVES)

HSP 1 Score: 150 bits (378), Expect = 7.980e-42
Identity = 79/175 (45.14%), Postives = 109/175 (62.29%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATR-----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEH 161
            R+++GHLSS  R+RD+++ F  YGRI +I ++ GF F+EFED RDA+DA+ E++G+EL   R+ ++  R  R  G +F  R                 RTEHRI VE L S  SWQDLKD  R+AG+V Y D   R  R  GVVE+ S  DMK+A+ +LD T L G+ I++ E+H
Sbjct:    5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRG-RFPQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAH-RNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLIEDH 177

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A6A4SRR9_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4SRR9_SCOMX)

HSP 1 Score: 150 bits (379), Expect = 8.060e-42
Identity = 82/183 (44.81%), Postives = 115/183 (62.84%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRG--------------------HRPNGPKFAT-RRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGR-RWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEHSGR 164
            R+Y+G LS H R++D+ R F  YG++ +ID++ G+ F+EFED RDA+DAV E++G+EL G R+V++  RG                    +RP   K+    RTEHR+ VE L S  SWQDLKDF RQAG+V Y+D    +GR   GV+E+ SR D+K AI +LD T + G+ IR+ E+ S R
Sbjct:    3 RVYVGKLSYHVREKDMQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGHGGSHGGRSSGYSSWNRPTRDKYGPPMRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADA--HKGRANEGVIEFRSRSDLKRAIEKLDGTDVNGRKIRLVEDKSRR 183

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BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Match: A0A8B9QB43_APTOW (Uncharacterized protein n=1 Tax=Apteryx owenii TaxID=8824 RepID=A0A8B9QB43_APTOW)

HSP 1 Score: 152 bits (383), Expect = 8.190e-42
Identity = 80/175 (45.71%), Postives = 110/175 (62.86%), Query Frame = 0

Query:    4 RIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGRELDGARIVVQPGRGHRPNGPKFATR-----------------RTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRLGGKYIRVREEH 161
            R+++GHLSS  R+RD+++ F  YGRI +I ++ GF F+EFED RDA+DA+ E++G+EL   R+ ++  R  R  G +FA R                 RTEHRI VE L S  SWQDLKD  R+AG+V Y D   R  R  GVVE+ S  DMK+A+ +LD T L G+ I++ E+H
Sbjct:    5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRG-RFAQRFSYYQSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAH-RNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLIEDH 177

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig6.12721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXG5_ECTSI	4.900e-112	96.41	Arginine/serine-rich splicing factor 6 n=2 Tax=Ect...	[more]
A0A7S0Q5F1_9EUKA	3.130e-45	51.43	Hypothetical protein (Fragment) n=1 Tax=Coccolithu...	[more]
A0A8C0AX14_9AVES	6.080e-43	46.47	Uncharacterized protein n=1 Tax=Buteo japonicus Ta...	[more]
A0A6P8RXC7_GEOSA	3.030e-42	45.16	serine/arginine-rich splicing factor 5-like isofor...	[more]
UPI00096B0064	4.060e-42	45.16	serine-arginine protein 55-like n=1 Tax=Aethina tu...	[more]
L1JS00_GUITC	4.160e-42	47.13	Uncharacterized protein n=2 Tax=Guillardia theta T...	[more]
A0A0Q3MS90_AMAAE	7.980e-42	45.14	Serine/arginine-rich splicing factor 5-like protei...	[more]
A0A8B9V2L9_9AVES	7.980e-42	45.14	Uncharacterized protein n=2 Tax=Anatidae TaxID=883...	[more]
A0A6A4SRR9_SCOMX	8.060e-42	44.81	Uncharacterized protein n=1 Tax=Scophthalmus maxim...	[more]
A0A8B9QB43_APTOW	8.190e-42	45.71	Uncharacterized protein n=1 Tax=Apteryx owenii Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 4..69 e-value: 1.7E-19 score: 80.8 coord: 89..158 e-value: 2.0E-10 score: 50.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 5..66 e-value: 4.6E-15 score: 55.2 coord: 90..156 e-value: 2.2E-10 score: 40.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 88..162 score: 11.059
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 3..73 score: 16.995
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..81 e-value: 4.3E-21 score: 77.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 87..161 e-value: 5.6E-19 score: 69.8
None	No IPR available	PANTHER	PTHR23003:SF30	SERINE/ARGININE-RICH-SPLICING FACTOR 5A-RELATED	coord: 3..242
None	No IPR available	PANTHER	PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	coord: 3..242
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig6	contig	P-fluviatile_contig6:3954629..3959491 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig6.12721.1	mRNA_P-fluviatile_contig6.12721.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig6 3954629..3964237 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig6.12721.1 ID=prot_P-fluviatile_contig6.12721.1|Name=mRNA_P-fluviatile_contig6.12721.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=246bp
MTNRIYIGHLSSHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAE
DAVAEMDGRELDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTS
WQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSREDMKNAIRQLDDTRL
GGKYIRVREEHSGRDSRSRSRSRRRSRTRSDSRSPPPRRRRERSLSPDER
DRGSGRGGHSGRGRDESRSRSRSRSRDSRSRSPARHSRSRSRHSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf