prot_P-fluviatile_contig6.12712.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12712.1
Unique Nameprot_P-fluviatile_contig6.12712.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length170
Homology
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BLAST of mRNA_P-fluviatile_contig6.12712.1 vs. uniprot
Match: D7G1Y8_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y8_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.900e-76
Identity = 124/162 (76.54%), Postives = 137/162 (84.57%), Query Frame = 0 
Query:    2 AFAGGCAHGWWQSAAVAAKFPPHQRSAVRVRAGFGKGVRFAAFAIVFESSSAIMEALRRKKDFVGGTVGGALAGMAYGVSDGVVAARRGLFYGIWLGGVFGLFRNHVASLREQVQRAEEEERLMQEERDAIGRAALARSIAGLDAQLKTWPAAR---EDETD 160
            AFAGGCAHGWW  AA+AAK+PPHQRS VRVRAG  +G+RFA FA++FE SSA+MEALRRKKDFVGGTVGGALAGMAYG      AAR GLFYG+WLGGVFGLFRNHVASLREQ + AEE+ERL QEERDAIG  AL RSIAG+DAQ++TWP A    EDETD
Sbjct:  146 AFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGLRFATFALIFEGSSAVMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGETALRRSIAGIDAQVRTWPTAAADSEDETD 307
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Y8_ECTSI1.900e-7676.54Similar to mitochondrial import inner membrane tra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..85
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 90..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3855406..3858472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12712.1mRNA_P-fluviatile_contig6.12712.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3855124..3858574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12712.1 ID=prot_P-fluviatile_contig6.12712.1|Name=mRNA_P-fluviatile_contig6.12712.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=170bp
MAFAGGCAHGWWQSAAVAAKFPPHQRSAVRVRAGFGKGVRFAAFAIVFES
SSAIMEALRRKKDFVGGTVGGALAGMAYGVSDGVVAARRGLFYGIWLGGV
FGLFRNHVASLREQVQRAEEEERLMQEERDAIGRAALARSIAGLDAQLKT
WPAAREDETDPKPTSSPRT*
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