prot_P-fluviatile_contig6.12690.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12690.1
Unique Nameprot_P-fluviatile_contig6.12690.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length353
Homology
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Match: A0A6H5L4L7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L7_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 5.060e-42
Identity = 108/205 (52.68%), Postives = 126/205 (61.46%), Query Frame = 0
Query:  133 PVVATLAASGDGGREDSSGKEDEGLRTPETQPGGDCAICLGPLEGNDHEEQQPQG------IYTVQGCGHDFHRACLVESRRAGNRGCPYCRGELERGLTPAPTAAERSAAAEREALSAARRAALNSAIFAMVDVHEALTAVGSVVATGRAATTAAAMSSANAAARSTQAAVSGVLDVVRLDEPSAAMYTAASTRLHASRMQLHR 331
            P   T   +G  G  + SG+ +E ++T   +  GDC ICL PL  +    QQP        +Y +Q CGH FHRACL E+RRAGN GCP CRG LERGLTP PTAAER A A+R+ALS AR A L+SA+ AMV V EALT + +    G A    AA   A  AARSTQ AVS VL VVR   PS  MY AAS RL ASR +L R
Sbjct:  174 PRTPTPGRAGSPGNCEQSGEGEE-VKTTVGRLEGDCVICLCPLRSS---SQQPXXXXXXXEVYQIQACGHKFHRACLAENRRAGNIGCPCCRGPLERGLTPTPTAAERRATADRQALSEARGATLDSALVAMVAVREALTVISNA---GPAQAVVAAAEPATLAARSTQEAVSTVLAVVRSTAPSVTMYAAASVRLEASRAELVR 371          
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Match: D7G207_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G207_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.470e-40
Identity = 103/197 (52.28%), Postives = 121/197 (61.42%), Query Frame = 0
Query:  142 GDGGREDSSGKEDEGLRTPETQPGGDCAICLGPLEGNDHEEQQPQG------IYTVQGCGHDFHRACLVESRRAGNRGCPYCRGELERGLTPAPTAAERSAAAEREALSAARRAALNSAIFAMVDVHEALTAVGSVVATGRAATTAAAMSSANAAARSTQAAVSGVLDVVRLDEPSAAMYTAASTRLHASRMQLHRI 332
            G  G  + SG+ +E ++T      GDC ICL PL  +    QQP        +Y +Q CGH FHRACL E+RRAGN GCP CRG LERGLTP PTAAER A A+R+ALS AR A L+SA+ AMV V EALT + +    G A    AA   A  AARSTQ AVS VL VVR   PS  MY AAS R   SR Q++ +
Sbjct:    8 GSPGNSEQSGEGEE-VKTTAGCWEGDCVICLCPLRSS---SQQPXXXXXXXEVYQIQACGHKFHRACLAENRRAGNIGCPCCRGPLERGLTPTPTAAERRATADRQALSEARGATLDSALVAMVAVREALTVISNA---GPAPAVVAAAEPATLAARSTQEAVSTVLAVVRSTAPSVTMYAAAS-RGRPSRYQINHL 196          
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Match: A0A6H5JHS7_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHS7_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.390e-20
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:  157 LRTPETQPGGDCAICLGPLEGNDHEEQQPQGIYTVQGCGHDFHRACLVESRRAGNRGCPYCRGELERGLTPAPTAAERSA 236
            L TP  + GG CAICL PL+     +++   +YTV+ C H FHR CLVE+RRAGN GCPYCRG+LERGLTP  TAAER A
Sbjct:   92 LTTPACR-GGSCAICLSPLKKPSGAKKE---VYTVRVCQHMFHRVCLVENRRAGNTGCPYCRGDLERGLTPEATAAERKA 167          
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Match: D7FR64_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR64_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 6.600e-14
Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  159 TPETQPGGDCAICLGPLE--GNDHEEQQPQGIYTVQGCGHDFHRACLVESRRAGNRGCPYCRGELERGLTPAPT 230
            TPE   G DCAICL PL   G    E+    +YT++ C H+FHR CLV +R  G   CP CRGE+ERGL+PAPT
Sbjct:   73 TPEPYGGEDCAICLSPLRRPGGSVPERP---VYTIRACEHNFHRDCLVANRAEGRTTCPCCRGEIERGLSPAPT 143          
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Match: A0A1Z5KKD5_FISSO (RING-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKD5_FISSO)

HSP 1 Score: 56.6 bits (135), Expect = 3.890e-5
Identity = 29/74 (39.19%), Postives = 38/74 (51.35%), Query Frame = 0
Query:  159 TPETQPGGDCAICLGPLEGNDHEEQQPQGIYTVQGCGHDFHRACLVESRRAGNRGCPYCRGELE--RGLTPAPT 230
            TP      +C ICL  L          Q + ++  CGH FHR CL++S RAG R C YCR   +  +GL P+ T
Sbjct:  410 TPAGSSTDECPICLATLS---------QSVVSLDYCGHKFHRECLLQSARAGQRSCAYCRKLFQEPQGLCPSGT 474          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L4L7_9PHAE5.060e-4252.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G207_ECTSI2.470e-4052.28RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JHS7_9PHAE2.390e-2061.25RING-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FR64_ECTSI6.600e-1454.05RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1Z5KKD5_FISSO3.890e-539.19RING-type E3 ubiquitin transferase n=1 Tax=Fistuli... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 168..217
e-value: 2.3E-6
score: 37.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 167..218
e-value: 3.8E-8
score: 33.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 168..218
score: 11.102
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 146..248
e-value: 4.7E-10
score: 40.7
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 161..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3680327..3682177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12690.1mRNA_P-fluviatile_contig6.12690.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3680289..3683384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12690.1 ID=prot_P-fluviatile_contig6.12690.1|Name=mRNA_P-fluviatile_contig6.12690.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=353bp
MEDNGFGEHVSRPRTRRRTAREAQDRAAVSTRTRGRTAASSLAPSQLAPP
RPPRRNNNPRGATAAAALAAGAAVASTSESPRTAPPSTTATPSPIAAPTP
SRPPPASILSGGGLNFVPPSTPAAGLGTPAATPVVATLAASGDGGREDSS
GKEDEGLRTPETQPGGDCAICLGPLEGNDHEEQQPQGIYTVQGCGHDFHR
ACLVESRRAGNRGCPYCRGELERGLTPAPTAAERSAAAEREALSAARRAA
LNSAIFAMVDVHEALTAVGSVVATGRAATTAAAMSSANAAARSTQAAVSG
VLDVVRLDEPSAAMYTAASTRLHASRMQLHRIMERFRAMLLVREAEVILG
EA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD