prot_P-fluviatile_contig6.12654.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12654.1
Unique Nameprot_P-fluviatile_contig6.12654.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length121
Homology
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: D7G1U2_ECTSI (Glycine cleavage system H protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 4.480e-44
Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 0
Query:    3 GPS-QLARAGWVAGG--NRRCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            GPS  LAR GW+A G  N+RC+ST+YAE+HEYL  +GDTA VGITAFAAKALGD+VFVDLPEVGD  EAG+SFGSVESVKAASDVY+PASGEV+E+NE
Sbjct:   27 GPSPSLARTGWLAAGAGNKRCMSTVYAESHEYLTVEGDTAKVGITAFAAKALGDVVFVDLPEVGDELEAGDSFGSVESVKAASDVYSPASGEVLEVNE 124          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A7S2WUU3_9STRA (Glycine cleavage system H protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUU3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.250e-31
Identity = 56/85 (65.88%), Postives = 68/85 (80.00%), Query Frame = 0
Query:   13 VAGGNRRCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            + GG  R  ST +AE+HEY+K DGD  T+GITA AA+ALGDIV+VDLP+ G  +E  ESFGSVESVKAASDVY P +GEV+E+NE
Sbjct:   42 LRGGLARPFSTYFAESHEYIKMDGDVGTIGITAHAAEALGDIVYVDLPDEGSDYEQKESFGSVESVKAASDVYVPVAGEVVEVNE 126          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A7S2BEF1_9STRA (Glycine cleavage system H protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BEF1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.840e-30
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0
Query:   19 RCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINEV 98
            R LST YAE+HEY+K +GD  TVGITA AA ALGDIVFVDLP+VG  F+  +SFG+VESVKAASDVY+P  GEV+E+NEV
Sbjct:   42 RPLSTYYAESHEYVKVEGDIGTVGITAHAADALGDIVFVDLPDVGSEFKQTDSFGTVESVKAASDVYSPIDGEVVEVNEV 121          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A7S2YPM9_9STRA (Glycine cleavage system H protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YPM9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.530e-30
Identity = 56/80 (70.00%), Postives = 64/80 (80.00%), Query Frame = 0
Query:   18 RRCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            RR +ST Y   HEY+K DG T T+GIT FA  ALGDIV+VD P+V D F+ G+SFGSVESVKAASDVYAP SG+VIEINE
Sbjct:   65 RRAMSTYYTPAHEYVKVDGSTGTIGITDFAQAALGDIVYVDFPDVDDEFDKGDSFGSVESVKAASDVYAPVSGKVIEINE 144          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A6U3XE37_9STRA (Glycine cleavage system H protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3XE37_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.150e-30
Identity = 59/90 (65.56%), Postives = 64/90 (71.11%), Query Frame = 0
Query:    9 RAGWVAGGNRRCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINEV 98
            + G +  G  R  ST Y   HEY K +G   T GIT FA   LGDIVFVDLPEVGD FE G+SFGSVESVKAASDVYAP SG V+EINEV
Sbjct:   27 KVGTIHTGAVRFASTYYTPAHEYCKVEGKVTTCGITDFAQAQLGDIVFVDLPEVGDEFEKGDSFGSVESVKAASDVYAPVSGTVVEINEV 116          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: K8Z6J2_NANGC (Glycine cleavage system H protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z6J2_NANGC)

HSP 1 Score: 113 bits (283), Expect = 9.260e-30
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
Query:   18 RRCLSTL-YAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEIN 96
            RR L+T  YA +HE++K DGD ATVGIT FAAKALGD+V+VDLPEVG +F  G+ FGSVESVKAASDVYAP SGE+IE N
Sbjct:   25 RRTLATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEVGASFSKGDPFGSVESVKAASDVYAPVSGEIIESN 104          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A7S2M5Z8_9STRA (Glycine cleavage system H protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5Z8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.670e-30
Identity = 57/82 (69.51%), Postives = 65/82 (79.27%), Query Frame = 0
Query:   16 GNRRCLSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            G+ R ++T Y   HEY K DG+ ATVGIT FA  ALGDIVFVDLPE  D FEA +SFGSVESVKAASDVYAP SG+V+E+NE
Sbjct:   36 GSARFMATYYTPAHEYCKVDGNVATVGITDFAQAALGDIVFVDLPEPDDEFEAKDSFGSVESVKAASDVYAPVSGKVLEVNE 117          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A448YUN3_9STRA (Glycine cleavage system H protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUN3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.170e-29
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   21 LSTLYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            LS+ Y   HEY+K +G+  T GIT FA  ALGDIVFVDLP VGD F+AG+SFGSVESVKAASDVYAPASG +IE+NE
Sbjct:   24 LSSYYTPAHEYIKVEGNIGTCGITDFAQSALGDIVFVDLPAVGDEFDAGDSFGSVESVKAASDVYAPASGTIIEVNE 100          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: A0A4D9DBS1_9STRA (Glycine cleavage system H protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBS1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.660e-29
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
Query:   18 RRCLSTL-YAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEIN 96
            RR L+T  YA +HE++K DGD ATVGIT FAAKALGD+V+VDLPEVG +F  G+ FGSVESVKAASDVYAP SGE+IE N
Sbjct:   46 RRTLATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEVGASFSKGDPFGSVESVKAASDVYAPVSGEIIESN 125          
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Match: F0JCS0_9DELT (Glycine cleavage system H protein n=3 Tax=Pseudodesulfovibrio TaxID=2035811 RepID=F0JCS0_9DELT)

HSP 1 Score: 111 bits (278), Expect = 2.600e-29
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0
Query:   24 LYAETHEYLKKDGDTATVGITAFAAKALGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINE 97
            LYA+THE++  +GD ATVGIT FA + LGD+ FV+LPEVGDTFEAG   GSVESVKAAS++YAP SGEVIE+NE
Sbjct:    7 LYAKTHEWVLVEGDVATVGITQFAQEQLGDLTFVELPEVGDTFEAGAEMGSVESVKAASEIYAPVSGEVIEVNE 80          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U2_ECTSI4.480e-4477.55Glycine cleavage system H protein n=2 Tax=Ectocarp... [more]
A0A7S2WUU3_9STRA7.250e-3165.88Glycine cleavage system H protein n=1 Tax=Rhizochr... [more]
A0A7S2BEF1_9STRA1.840e-3071.25Glycine cleavage system H protein n=1 Tax=Dictyoch... [more]
A0A7S2YPM9_9STRA3.530e-3070.00Glycine cleavage system H protein n=1 Tax=Amphipro... [more]
A0A6U3XE37_9STRA9.150e-3065.56Glycine cleavage system H protein n=1 Tax=Ditylum ... [more]
K8Z6J2_NANGC9.260e-3072.50Glycine cleavage system H protein n=1 Tax=Nannochl... [more]
A0A7S2M5Z8_9STRA9.670e-3069.51Glycine cleavage system H protein n=1 Tax=Skeleton... [more]
A0A448YUN3_9STRA1.170e-2971.43Glycine cleavage system H protein n=1 Tax=Pseudo-n... [more]
A0A4D9DBS1_9STRA1.660e-2972.50Glycine cleavage system H protein n=1 Tax=Nannochl... [more]
F0JCS0_9DELT2.600e-2971.62Glycine cleavage system H protein n=3 Tax=Pseudode... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.100coord: 21..100
e-value: 2.6E-30
score: 106.8
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 24..97
e-value: 1.3E-27
score: 96.1
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 20..97
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 63..92
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 38..120
score: 22.892
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 23..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3288854..3290993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12654.1mRNA_P-fluviatile_contig6.12654.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3288374..3290993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12654.1 ID=prot_P-fluviatile_contig6.12654.1|Name=mRNA_P-fluviatile_contig6.12654.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=121bp
MAGPSQLARAGWVAGGNRRCLSTLYAETHEYLKKDGDTATVGITAFAAKA
LGDIVFVDLPEVGDTFEAGESFGSVESVKAASDVYAPASGEVIEINEVGH
ILHRQCCSHSSSGRDLVLFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033753GCV_H/Fam206
IPR002930GCV_H
IPR0030162-oxoA_DH_lipoyl-BS
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif