prot_P-fluviatile_contig6.12626.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12626.1
Unique Nameprot_P-fluviatile_contig6.12626.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length101
Homology
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A3B1IUQ7_ASTMX (Ribonuclease H n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IUQ7_ASTMX)

HSP 1 Score: 66.2 bits (160), Expect = 1.630e-10
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   25 SRQEKKMPVIPSVMIPDVIALVHLFHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCSCRRLVREPCALDETHAP 100
            S+Q+K   V+P  +    ++ +H   GH+G   TLHL ++ FFWPRM GDIRQYV  C       E C L +T  P
Sbjct:  973 SKQKKSQFVLPECLRQQALSGLHDMAGHQGQARTLHLARQRFFWPRMEGDIRQYVRCC-------ERCILAKTPEP 1041          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: UPI002013D1AE (uncharacterized protein LOC125268395 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013D1AE)

HSP 1 Score: 54.7 bits (130), Expect = 1.780e-6
Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 0
Query:   25 SRQEKKMPVIPSVMIPDVIALVHLFHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCSCRRLVREPC 92
            S +E    V+PSV    V+   H   GH G+  T  L++  FFWP++AGD+ QYV +C      + PC
Sbjct:  127 SGEELTQLVLPSVFKEVVLKATHDELGHLGIERTTDLLRSRFFWPKLAGDVEQYVKNCGECVTRKTPC 194          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A3P9D8I3_9CICH (Ribonuclease H n=1 Tax=Maylandia zebra TaxID=106582 RepID=A0A3P9D8I3_9CICH)

HSP 1 Score: 53.1 bits (126), Expect = 5.940e-6
Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 0
Query:   14 FAGMRMECCGSSRQEKKMPVIPSVMIPDVIALVHLF----HGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCSCRRLVR 89
            F G R+   G      K+  +     P  +  V  F     GH GV  TL  ++  FFWP+MA D+++YV+SCS  +L +
Sbjct:   62 FLGYRITSSGVKPDPDKVKAVKEFDTPTSVKHVRQFLGLTAGHLGVSKTLARLRFRFFWPKMAADVKRYVISCSVCQLTK 141          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A3B3HV01_ORYLA (Uncharacterized protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3HV01_ORYLA)

HSP 1 Score: 52.8 bits (125), Expect = 8.850e-6
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
Query:   34 IPSVMIPDVIALVHLFH--GHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCS-CRR 86
            +P  +  D I   H      H GV  TLHL++R F+WP MA D+R+YV +CS C R
Sbjct:  993 VPQSLRSDAITWAHASRIACHGGVARTLHLLRRRFYWPSMAKDVREYVAACSTCAR 1048          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A8C5MRI8_9ANUR (Ribonuclease H n=5 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MRI8_9ANUR)

HSP 1 Score: 52.0 bits (123), Expect = 1.660e-5
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 0
Query:   28 EKKMPVIPSVMIPDVIALVH--LFHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSC 82
            EKK+  +P+  I  V+   H  L  GH G+  T  L+ RYF+WPRMA +I+ YV +C
Sbjct:  991 EKKI-YVPATAILPVLQYCHDSLLGGHGGIRKTTDLINRYFWWPRMAKNIKSYVTNC 1046          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A8C5Q6H4_9ANUR (Integrase catalytic domain-containing protein n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5Q6H4_9ANUR)

HSP 1 Score: 51.6 bits (122), Expect = 1.680e-5
Identity = 24/68 (35.29%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   25 SRQEKKMPVIPSVMIPDVIALVHLFH-----GHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCS-CRR 86
            ++++++  ++P   + D + ++  FH     GH G+  T  L+KRYF+WP +A D+R +V SCS C R
Sbjct:   24 TQEQRQQCLVP---VQDRVMVLQQFHDTLGSGHPGIRKTKDLIKRYFWWPTLAQDVRDFVGSCSVCAR 88          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A1A8F134_9TELE (Integrase_H2C2 domain-containing protein (Fragment) n=1 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8F134_9TELE)

HSP 1 Score: 49.3 bits (116), Expect = 2.920e-5
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   34 IPSVMIPDVIALVHL--FHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCS-CRR 86
            +P+ +  D+I   H   F  H GVG TL L++R F+WP M  D+R+Y+ +CS C R
Sbjct:   37 VPTRVRGDLIHWAHTAKFSIHPGVGRTLALIRRTFWWPSMYKDVREYINACSICAR 92          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A8C6LI56_NOTFU (Uncharacterized protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LI56_NOTFU)

HSP 1 Score: 50.8 bits (120), Expect = 3.980e-5
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query:   34 IPSVMIPDVIALVHL--FHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSC 82
            +P VM   VI   H   F  H GVG TL L+KR F+WP +  D+++YVL+C
Sbjct:  122 VPQVMRGRVIHWAHTGKFSIHPGVGRTLALIKRSFWWPSIYKDVKEYVLAC 172          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A8C6M2A9_NOTFU (Ribonuclease H n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6M2A9_NOTFU)

HSP 1 Score: 50.8 bits (120), Expect = 4.150e-5
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query:   34 IPSVMIPDVIALVHL--FHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSC 82
            +P VM   VI   H   F  H GVG TL L+KR F+WP +  D+++YVL+C
Sbjct:  647 VPQVMGGKVIHWAHTGKFSIHPGVGQTLALIKRSFWWPSIYKDVKEYVLAC 697          
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Match: A0A8C6LF62_NOTFU (Ribonuclease H n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LF62_NOTFU)

HSP 1 Score: 50.8 bits (120), Expect = 4.220e-5
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   34 IPSVMIPDVIALVHL--FHGHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCS-CRR 86
            +PS +  D+I   H   F  H GVG TL L++R F+WP M  D+R+Y+ +CS C R
Sbjct: 1014 VPSRVRGDLIHWAHTARFSVHPGVGRTLALIRRTFWWPSMFKDVREYINACSICAR 1069          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A3B1IUQ7_ASTMX1.630e-1042.11Ribonuclease H n=1 Tax=Astyanax mexicanus TaxID=79... [more]
UPI002013D1AE1.780e-638.24uncharacterized protein LOC125268395 n=1 Tax=Megal... [more]
A0A3P9D8I3_9CICH5.940e-633.75Ribonuclease H n=1 Tax=Maylandia zebra TaxID=10658... [more]
A0A3B3HV01_ORYLA8.850e-644.64Uncharacterized protein n=1 Tax=Oryzias latipes Ta... [more]
A0A8C5MRI8_9ANUR1.660e-543.86Ribonuclease H n=5 Tax=Leptobrachium leishanense T... [more]
A0A8C5Q6H4_9ANUR1.680e-535.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A1A8F134_9TELE2.920e-542.86Integrase_H2C2 domain-containing protein (Fragment... [more]
A0A8C6LI56_NOTFU3.980e-547.06Uncharacterized protein n=1 Tax=Nothobranchius fur... [more]
A0A8C6M2A9_NOTFU4.150e-547.06Ribonuclease H n=1 Tax=Nothobranchius furzeri TaxI... [more]
A0A8C6LF62_NOTFU4.220e-544.64Ribonuclease H n=1 Tax=Nothobranchius furzeri TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 34..83
e-value: 1.2E-13
score: 50.9
NoneNo IPR availableGENE3D1.10.340.70coord: 9..86
e-value: 6.3E-10
score: 41.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2995234..2995536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12626.1mRNA_P-fluviatile_contig6.12626.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2994378..2995700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12626.1 ID=prot_P-fluviatile_contig6.12626.1|Name=mRNA_P-fluviatile_contig6.12626.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=101bp
MKGVELGGTACQAFAGMRMECCGSSRQEKKMPVIPSVMIPDVIALVHLFH
GHEGVGATLHLVKRYFFWPRMAGDIRQYVLSCSCRRLVREPCALDETHAP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2