prot_P-fluviatile_contig6.12605.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12605.1
Unique Nameprot_P-fluviatile_contig6.12605.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length279
Homology
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BLAST of mRNA_P-fluviatile_contig6.12605.1 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 1.200e-144
Identity = 223/295 (75.59%), Postives = 254/295 (86.10%), Query Frame = 0 
Query:    1 MATASGQA----HDSSESSGAEEDLSEKKCSKSQ-------------AADRSQALVKWAGGEAAASGVSAAMVAVGVTTLVAPAVAVIVLIGHVIVRGSIRAVKKKRKVRAEQKAHLEQLSLTDTTAGSSARHFTVVLDGIGPNGEFNAFVAPSDNPSYAPVSAGHLKGISKLISGATNCNVRDMGGFTEDTSAPFTVRISMPDVLALMRQSWVYDRFCQTKCKSMTVVVLRSQHSRGKDKLRVAWENSGSLDHTKAQVYTEREWKQTKYAGKTKTMPEGIADVDMALDKTLVFD 278
            MA+ SG+A    ++SS+ +G++EDL      K +             A DRSQA+VKWAGGEAA++GVSAAMVA G+TTLVAP VAVIVL+GHVIVRGSIRAVKKK KVRAEQKAHLEQL+LT+TTA SS+ HFTVVL+G+GPNGEFN++V+P+D+ SY  VS GHLKGISKLISGATNCNVRDMGG+TE  + PF VRISMPDVLALMRQSWVY+RFCQTKC +MTVVVLRSQHSRGKDKLRVAWENSGSLD+TKAQVYTEREWK+TK+AGKTKTMPEGIADVDMALDKTLVFD
Sbjct:    1 MASTSGEAEEYAYESSDITGSDEDLPSSNSKKGKDXXXXXXXXXXXXAVDRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTETTARSSSGHFTVVLNGVGPNGEFNSYVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD 295
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9N5_9PHAE1.200e-14475.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..79
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2751347..2754525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12605.1mRNA_P-fluviatile_contig6.12605.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2750980..2755872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12605.1 ID=prot_P-fluviatile_contig6.12605.1|Name=mRNA_P-fluviatile_contig6.12605.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=279bp
MATASGQAHDSSESSGAEEDLSEKKCSKSQAADRSQALVKWAGGEAAASG
VSAAMVAVGVTTLVAPAVAVIVLIGHVIVRGSIRAVKKKRKVRAEQKAHL
EQLSLTDTTAGSSARHFTVVLDGIGPNGEFNAFVAPSDNPSYAPVSAGHL
KGISKLISGATNCNVRDMGGFTEDTSAPFTVRISMPDVLALMRQSWVYDR
FCQTKCKSMTVVVLRSQHSRGKDKLRVAWENSGSLDHTKAQVYTEREWKQ
TKYAGKTKTMPEGIADVDMALDKTLVFD*
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