prot_P-fluviatile_contig6.12564.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12564.1
Unique Nameprot_P-fluviatile_contig6.12564.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length202
Homology
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BLAST of mRNA_P-fluviatile_contig6.12564.1 vs. uniprot
Match: D8LGS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS6_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.500e-70
Identity = 125/193 (64.77%), Postives = 144/193 (74.61%), Query Frame = 0 
Query:    6 SEALGPAALGLFFLFASYLNLNDPDWGLWSTAYALGAAVCGWSALQGAAGTGGDEGAAMQEGAAMDGASRTRRSVARTYGAACLGLAAYSAFLAPRGEPVKNGGYDHRMIMAFLSSEIAREAGGALIMAQAMALCAFYWRPGKATAAVAATTS-RTLVGAMSVAVALVAIGLGMYLPGYLHRAGITVAAHCGG 197
            S+ + P ALG FFL ASYLNLNDPDW LWSTAYALGA VCGWSALQ A   G   GA    G A D AS +RR  A  YGAACLGLA +SAFLAPRGEP++ G  +  +++ FLSSE+AREAGGA I+AQAMA+CAF WRP  ATA  A +TS R ++G +SVAVAL  + LG+YLPGYL RAGI V AHCGG
Sbjct:    4 SDVVAPIALGAFFLLASYLNLNDPDWILWSTAYALGAVVCGWSALQAAGAVG--RGA---RGTAKDDASYSRRMTAMAYGAACLGLAGHSAFLAPRGEPLETG--NDGIVLTFLSSEVAREAGGAFILAQAMAMCAFVWRPRDATATGAPSTSGRAVIGVVSVAVALAGVVLGVYLPGYLQRAGIAVPAHCGG 189
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BLAST of mRNA_P-fluviatile_contig6.12564.1 vs. uniprot
Match: A0A835YT82_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT82_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-7
Identity = 60/182 (32.97%), Postives = 74/182 (40.66%), Query Frame = 0 
Query:   13 ALGLFFLFASYLNLNDPDWGLWSTAYALGAAVCGWSALQGAAGTGGDEGAAMQEGAAMDGASRTRRSVARTYG-AACLGLAAYSAFLAPRGEPVKNGGYDHRMIMAFLSSEIAREAGGALIMAQAMALCAFYWRPGKATAAVAATTSRTLVGAMSVAVALVAIGLGMYLPGYLHRAGITVAA 193
            A   F  FA+Y+NLNDPD  LWST+Y     +C   AL  A                       R SV      AA L     SA+   + + +   G            E  RE GGAL+   AM +CA       A  + +   S   V A  V VA VAIGLG+YLPGY    G+   A
Sbjct:    9 ASACFLFFAAYVNLNDPDAWLWSTSYGSAGLLCAACALTAA-----------------------RNSVLHAAALAASLASFCLSAYSFSQLDGINTSGISGAF--GVFEIEYVREGGGALLQLLAMLICARVTDDRAAKGSSSGLGSGVSVAA--VLVASVAIGLGLYLPGYYRNLGLQPTA 163
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGS6_ECTSI1.500e-7064.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT82_9STRA1.100e-732.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029377TMEM220 proteinPFAMPF15071TMEM220coord: 17..142
e-value: 5.0E-19
score: 69.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2400603..2402329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12564.1mRNA_P-fluviatile_contig6.12564.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2400603..2402329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12564.1 ID=prot_P-fluviatile_contig6.12564.1|Name=mRNA_P-fluviatile_contig6.12564.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=202bp
MSFLSSEALGPAALGLFFLFASYLNLNDPDWGLWSTAYALGAAVCGWSAL
QGAAGTGGDEGAAMQEGAAMDGASRTRRSVARTYGAACLGLAAYSAFLAP
RGEPVKNGGYDHRMIMAFLSSEIAREAGGALIMAQAMALCAFYWRPGKAT
AAVAATTSRTLVGAMSVAVALVAIGLGMYLPGYLHRAGITVAAHCGGNEE
D*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029377TMEM220