prot_P-fluviatile_contig6.12497.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12497.1
Unique Nameprot_P-fluviatile_contig6.12497.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length696
Homology
BLAST of mRNA_P-fluviatile_contig6.12497.1 vs. uniprot
Match: A0A6H5JT76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT76_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 3.020e-128
Identity = 326/552 (59.06%), Postives = 370/552 (67.03%), Query Frame = 0
Query:  129 RQSSGK-MSASEAGVERKRQGRVQELNKQLQRFASLRMWRQALAALDKAKADGLPITSSVYSCAINAMSKGGRYKEAMALLEEMIAGGSAAPGRGDPAPTPRGPNVSPSVTSYNAAIMACARANKAPAALRLLDEMSSRSGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRAAGVEPDAVCLKAAMEACESKGASEEAAEVLEQVRELDPQPSPSALTGILTSAIGXXXXXXXXXXAVDWLTDVRMVNGGRLPPAPAYAAXXXXXXXXXXXXXXXXLISELXXXXXXXXXXXXXXHQRPTLECYNAVVLGYAMSGDMDGALRTLKEEVVDAGLKPDTQXXXXXXXXXXXXXXXXXXXALLYEQRSGEDDWIGFDQNFPDARPNRASYNAAMEACGRAGQVRAALALLDAMRAASLRNPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDGVKRDQRCSLAAFSAVIAGPEGSGAGGKGREDDAADILEDMIRERVSTSGGALAAARESLAESIKARGGGGVKFARAMAALGVLEEAQAKKAAAKAE 679
            +Q  GK +S+ +  +ERK+Q +V EL KQLQRFASLRMWR+A  A DKAKAD LPIT++ Y+ AIN MSKGGR+KEA+ LLEEMIA G+ + G         GP V+PSV SYNAAI AC+RANK PAALRLLDEMSSRSGL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXMRAAG+EPD VCLK AMEAC SKGA +EA  VLEQVRELDP+PS S +  +LTSAI           A DWLTD+RM  GGRLPP  AYAA                LI+EL               QRPTLECY+AVVLG A++GD   ALR LK +V  AGL+P+TQ                    +L EQRSG          FPDA P+R SYN A+EACGR          LDAMRAAS RN RL   XXXXXXXXXXXXXXXXXXXXXXXXXX  KDG+K DQ CSLAAFSAV A          GR D AA+ILED+ R  VSTS GA+A+A+E L E + +   GG +FAR MAA  VLE AQA+KAA KAE
Sbjct:  124 KQQQGKGLSSVDGTIERKQQLKVAELEKQLQRFASLRMWRRATEAFDKAKADRLPITAATYTHAINVMSKGGRWKEAIELLEEMIAAGNDSNG---------GPKVTPSVVSYNAAITACSRANKVPAALRLLDEMSSRSGLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXMRAAGMEPDLVCLKGAMEACRSKGAPKEAGVVLEQVRELDPRPSASTMADVLTSAIAACVTEGAWEQATDWLTDIRMARGGRLPPPEAYAAAANACARAGQGVRARALIAELDNGGKDEA-------QRPTLECYDAVVLGSALAGDPKEALRILKVDVPKAGLQPNTQGFNHVLQGFAKVGDWKTAVTVLDEQRSGA---------FPDAPPDRWSYNNAIEACGRXXXXXXXXXXLDAMRAASHRNRRLRPCXXXXXXXXXXXXXXXXXXXXXXXXXXMKKDGIKGDQLCSLAAFSAVAA---------VGRADKAAEILEDLARGGVSTSEGAVASAKEGLVEVLGSDIEGGGRFARVMAAFEVLEAAQAEKAAKKAE 641          
BLAST of mRNA_P-fluviatile_contig6.12497.1 vs. uniprot
Match: A0A6H5L8D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D4_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 4.910e-5
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 0
Query:  166 WRQALAALDKAKADGLPITSSVYSCAINAMSKGGRYKEAMALLEEMIAGGSAAPGRGDPAPTPRGPNVSPSVTSYNAAIMACARANKAPAALRLLDEM 263
            WR A+    +A+A G+ + +SVYSC I+ ++K GR+ EA+ LL+E          + DPA       + P+   Y AA+ ACAR      AL LLDEM
Sbjct:   91 WRGAVKVFRRARARGMVMDNSVYSCIISVVAKSGRWSEAVELLQEA---------KEDPA------GLDPNKYCYTAAVSACARGRNWELALALLDEM 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT76_9PHAE3.020e-12859.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L8D4_9PHAE4.910e-538.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 666..686
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 232..413
coord: 354..489
coord: 427..590
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..696
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.524
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 515..541
e-value: 0.0043
score: 17.2
coord: 469..491
e-value: 0.088
score: 13.1
coord: 432..455
e-value: 0.16
score: 12.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 515..543
e-value: 1.4E-4
score: 19.8
coord: 239..273
e-value: 2.6E-4
score: 19.0
coord: 274..308
e-value: 3.4E-6
score: 24.9
coord: 187..215
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 272..306
score: 11.071
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..464
score: 9.635
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 9.613
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 346..382
score: 5.371
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..271
score: 8.659
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 512..546
score: 9.493
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..417
score: 5.305
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 307..341
score: 7.432
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 552..586
score: 8.342
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..495
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 5.097
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 150..348
e-value: 4.7E-40
score: 139.8
coord: 507..694
e-value: 4.9E-18
score: 67.5
coord: 349..506
e-value: 1.4E-19
score: 72.6
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 145..347
e-value: 3.4E-12
score: 46.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1789834..1794527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12497.1mRNA_P-fluviatile_contig6.12497.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1789776..1794527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12497.1 ID=prot_P-fluviatile_contig6.12497.1|Name=mRNA_P-fluviatile_contig6.12497.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=696bp
MRNHAAAAASTFMALVSSGECFIATPAAAGIGDGRTSSCSSAGDAACSST
TTIARAPPGYDSESFSAYSRAGGVRRRRDGSGPLRAQSEDVGAPARAASV
ATSAAAVAATAQKNRAHPTVKRPPRGQGRQSSGKMSASEAGVERKRQGRV
QELNKQLQRFASLRMWRQALAALDKAKADGLPITSSVYSCAINAMSKGGR
YKEAMALLEEMIAGGSAAPGRGDPAPTPRGPNVSPSVTSYNAAIMACARA
NKAPAALRLLDEMSSRSGLAPDAYSYAAALSALARARNPAAALRLLGEMR
AAGVEPDAVCLKAAMEACESKGASEEAAEVLEQVRELDPQPSPSALTGIL
TSAIGACAAEGAWERAVDWLTDVRMVNGGRLPPAPAYAAAAYACARAGQG
VRARSLISELERGGGGGAGESEEQHQRPTLECYNAVVLGYAMSGDMDGAL
RTLKEEVVDAGLKPDTQGFNHAIQGYARLGDWQKALALLYEQRSGEDDWI
GFDQNFPDARPNRASYNAAMEACGRAGQVRAALALLDAMRAASLRNPRLR
PDRASYAGALQACRAAGDGSAALALLRSMRKDGVKRDQRCSLAAFSAVIA
GPEGSGAGGKGREDDAADILEDMIRERVSTSGGALAAARESLAESIKARG
GGGVKFARAMAALGVLEEAQAKKAAAKAERAAAEAGEMETGEAGVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long