prot_P-fluviatile_contig6.12495.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12495.1
Unique Nameprot_P-fluviatile_contig6.12495.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length188
Homology
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: A0A6H5L1F8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F8_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.610e-16
Identity = 41/62 (66.13%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MARVPTDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIMAEGE 62
            M+ +PTD+ELE AVREIL V N+++ SLK+IR++LE RF V LSE+KAFLKE VTAIM+EG+
Sbjct:    1 MSTIPTDSELEVAVREILRVANVEQTSLKIIRKKLETRFSVDLSEKKAFLKETVTAIMSEGD 62          
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: D7G2V1_ECTSI (SWIB/MDM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V1_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 9.500e-12
Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MARVPTDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIMA 59
            M+ +PTD+ELE AVREIL V N++++SLK+IR++LE  F V LSE+KAFLK+ VT   A
Sbjct:    1 MSSMPTDSELEVAVREILRVANVEQMSLKIIRKKLETHFSVDLSEKKAFLKDTVTVTKA 59          
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: A0A7N0TAK5_KALFE (SWIB/MDM2 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TAK5_KALFE)

HSP 1 Score: 55.1 bits (131), Expect = 8.830e-6
Identity = 76/171 (44.44%), Postives = 99/171 (57.89%), Query Frame = 0
Query:    6 TDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIMAEG--ESAEGEGDEQEEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKAKTKTKRTE-------FQLSPALYEFMGCKDTMMARGDVTKAVWAYIRSASFKTP 167
            +D E+ A +RE L   ++   +  ++RRRLEE   + LS++KAF++E V   +     ES EGE +E   +KXXXXXXXXXXXXXXXXXXXXXXXXXXXX               K KT+ KR           LSP L EF G  +  MAR +V K +WAYI+  + + P
Sbjct:    3 SDEEIAARLREFLRTSDLSTTTTAIVRRRLEEDLGIDLSDKKAFVREQVDLFLQSQVVESGEGEVEEASGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSNGYKTRKRVS-KKVKTEVKRKGGGGFCKVCSLSPQLQEFTGTSE--MARTEVVKIIWAYIKEKNLQDP 170          
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: A0A6I9QAK6_ELAGV (upstream activation factor subunit spp27 isoform X1 n=7 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QAK6_ELAGV)

HSP 1 Score: 55.1 bits (131), Expect = 1.170e-5
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    6 TDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIM---------AEGESAEG--EGDEQEEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKAKTKTKRTEFQLSPALYEFMGCKDTMMARGDVTKAVWAYIRSASFKTP 167
            +D+EL   +RE L   ++   +  ++RR+LEE F V LS++KAF++E V   +         AE + + G  EGDE  E+   XXXXXXXXXXXXXXXXXXXX                    VK +         LSPAL +F+G  ++ +AR +V K +WAYIR  S + P
Sbjct:    3 SDSELVERLREFLRASDLSTTTTAIVRRKLEEDFGVDLSDKKAFIREQVDLFLHSELNDNKEAEEDDSSGVDEGDEDGEEGSGXXXXXXXXXXXXXXXXXXXXGRSNEGGSSRKRRFNKLNKEVKRRGGGFTKLCSLSPALQQFVG--ESELARTEVVKKLWAYIRENSLQDP 173          
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: A0A7N0TA89_KALFE (Uncharacterized protein n=4 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TA89_KALFE)

HSP 1 Score: 55.1 bits (131), Expect = 1.240e-5
Identity = 76/171 (44.44%), Postives = 99/171 (57.89%), Query Frame = 0
Query:    6 TDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIMAEG--ESAEGEGDEQEEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKAKTKTKRTE-------FQLSPALYEFMGCKDTMMARGDVTKAVWAYIRSASFKTP 167
            +D E+ A +RE L   ++   +  ++RRRLEE   + LS++KAF++E V   +     ES EGE +E   +KXXXXXXXXXXXXXXXXXXXXXXXXXXXX               K KT+ KR           LSP L EF G  +  MAR +V K +WAYI+  + + P
Sbjct:    3 SDEEIAARLREFLRTSDLSTTTTAIVRRRLEEDLGIDLSDKKAFVREQVDLFLQSQVVESGEGEVEEASGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSNGYKTRKRVS-KKVKTEVKRKGGGGFCKVCSLSPQLQEFTGTSE--MARTEVVKIIWAYIKEKNLQDP 170          
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Match: A0A5N6QLL1_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6QLL1_9ROSI)

HSP 1 Score: 52.8 bits (125), Expect = 7.410e-5
Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 0
Query:    6 TDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFLKEAVTAIM-AEGESAE--GEGDEQEEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKAKTKTKRTEFQ----LSPALYEFMGCKDTMMARGDVTKAVWAYIRSASFKTPR 168
            +D+EL A +RE L   +++  +   +RRRLEE F V L+E+KAF++E V   + +E E AE  GE D      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +  + K +   F     LSP L EF+G  +  MAR +V K +WAYIR    + P+
Sbjct:    3 SDSELIARLREFLRGSDLNTTTTGTVRRRLEEDFGVDLTEKKAFIREQVDLFLQSEQEEAEEVGEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRSNKLSPEVKKRGGGFNKLCSLSPQLQEFLG--EPEMARTEVVKQLWAYIREKDLQDPK 170          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L1F8_9PHAE7.610e-1666.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V1_ECTSI9.500e-1259.32SWIB/MDM2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7N0TAK5_KALFE8.830e-644.44SWIB/MDM2 domain-containing protein n=1 Tax=Kalanc... [more]
A0A6I9QAK6_ELAGV1.170e-539.31upstream activation factor subunit spp27 isoform X... [more]
A0A7N0TA89_KALFE1.240e-544.44Uncharacterized protein n=4 Tax=Kalanchoe fedtsche... [more]
A0A5N6QLL1_9ROSI7.410e-550.00Uncharacterized protein n=1 Tax=Carpinus fangiana ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..123
NoneNo IPR availableGENE3D1.10.10.60coord: 1..60
e-value: 1.2E-9
score: 40.0
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 6..168
NoneNo IPR availablePANTHERPTHR13844:SF52SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEINcoord: 6..168
NoneNo IPR availableSUPERFAMILY109715DEK C-terminal domaincoord: 3..58
IPR014876DEK, C-terminalPFAMPF08766DEK_Ccoord: 5..57
e-value: 1.5E-15
score: 56.8
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10coord: 119..178
e-value: 2.7E-6
score: 29.2
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 126..166
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 128..167
e-value: 1.3E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1759148..1764060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12495.1mRNA_P-fluviatile_contig6.12495.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1759123..1767488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12495.1 ID=prot_P-fluviatile_contig6.12495.1|Name=mRNA_P-fluviatile_contig6.12495.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp
MARVPTDAELEAAVREILGVVNIDEVSLKVIRRRLEERFEVGLSERKAFL
KEAVTAIMAEGESAEGEGDEQEEQKDAEEEEEEEEEEEDAEEEEDAEEEE
DAEEEEEEEEEEEEEEIVKAKTKTKRTEFQLSPALYEFMGCKDTMMARGD
VTKAVWAYIRSASFKTPRTAGRSGTTKKCSVCSSARP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014876DEK_C
IPR036885SWIB_MDM2_dom_sf
IPR003121SWIB_MDM2_domain