prot_P-fluviatile_contig6.12492.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12492.1
Unique Nameprot_P-fluviatile_contig6.12492.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length149
Homology
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BLAST of mRNA_P-fluviatile_contig6.12492.1 vs. uniprot
Match: D7G2H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H7_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 5.030e-51
Identity = 103/128 (80.47%), Postives = 109/128 (85.16%), Query Frame = 0 
Query:   22 MAFKAFVVLVALCLVSLASGFVAPTSVARTAVGMKQALQMSAKSGLPAAVPAAALATA-AAACSPLASFAADSSSVVAQLPTELLADNGTATLAIVVGMFIPCAFLVTLYFGTEQKKKGIIEGQEMKK 148
            MAFKAF VLVALCLVSLASGFVAPT+VAR  V MKQA+QMSAKS LPAA          AA CSPLASFAAD SS +AQLPTELLADNGTATLAIVVGMFIPC+FL+TLYFGTEQKKKG+IEGQEM K
Sbjct:    1 MAFKAFAVLVALCLVSLASGFVAPTAVARN-VAMKQAVQMSAKSSLPAAXXXXXXXXXXAAVCSPLASFAADPSSALAQLPTELLADNGTATLAIVVGMFIPCSFLITLYFGTEQKKKGVIEGQEMNK 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2H7_ECTSI5.030e-5180.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..148
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 69..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1710464..1713698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12492.1mRNA_P-fluviatile_contig6.12492.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1710464..1713698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12492.1 ID=prot_P-fluviatile_contig6.12492.1|Name=mRNA_P-fluviatile_contig6.12492.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=149bp
TYSFVFLSSASSPTPFTSILAMAFKAFVVLVALCLVSLASGFVAPTSVAR
TAVGMKQALQMSAKSGLPAAVPAAALATAAAACSPLASFAADSSSVVAQL
PTELLADNGTATLAIVVGMFIPCAFLVTLYFGTEQKKKGIIEGQEMKK*
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