prot_P-fluviatile_contig6.12474.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12474.1
Unique Nameprot_P-fluviatile_contig6.12474.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length536
Homology
BLAST of mRNA_P-fluviatile_contig6.12474.1 vs. uniprot
Match: D8LDN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN9_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 2.400e-186
Identity = 293/523 (56.02%), Postives = 338/523 (64.63%), Query Frame = 0
Query:   18 MTGITAACTCSVDGRSGTADTSRYNGYSFTGCGAHVDYTYE-LSGGGYERIWCYVTSPPHCPGESPYIPEGFKTKNTLPEWEEDGAAWKECYDGYRCEAWWGSLEGSPDGEPVVLDAPLDWPDCCALCSDSNGGGGDGTAGEKPTTGAACVGWSFDPSTGSCQRMSAVESVSRDLSWSV---NSTVHGYPGYFEAPLDDCWGRTQYDLCANTNVAFIASGMLVAFFSLPCFWFLFIRRLSKSTGLLREL-IADPDS-RLVKAACEQVTGTTSVEYTGKGARTVKHRYSGTFITSDGALLVVPPTPTLLINTEDGRDAEKNMLKVLFFTNLDPRADPLVTNECGTRDEIRSAFSTLLKAAKGR-EKRRTKKA-----------INTISSSSTDRRFDCRLLVGTPRGGEYSRRGSTTSEALLVGILGEDQITCGFNNTLQEHPVQYAITFCCLALAISLLVILCVTLLTNDASQHMAAYTFEGDFEIGAVVGLVLLVSFPVLLCAWRLRLIRSNSRLITECPRV 522
            MTGITA CTCSVDG SG ADT RY GYSFTGCGAHVDYT     GGGYER WCYVTSPP CPGESPYIPEGFKT NTLPEWE  GAAWKECYDGYRCEAWWG LEGSPDGEPVVLDAPLDWPDCCALCS    G G        TT + CV WSFDPSTGSCQRMS V   S D SW     N+T+ GYPGYFEAPL DCWGR+QYDLC NTN AFI  G++VAF SL C W       S   GLLREL I  P S RLVK AC +V  T +V+ TGKG   + + Y+GTF+T DGA+  +PP        E  R  EK ML VL  T  +PRADP +   C T D +R+ FS +++A   + E  R+  +           +     ++ D RFDC LLVGT         G T ++ LLVGILGED+ITC   + L      +     C  LA +LL I+C+TLLTN+A+Q+MAA+TFEGD  +GA++GLVL    P+ L  W+ R      R I ECP V
Sbjct:    1 MTGITAPCTCSVDGVSGLADT-RYQGYSFTGCGAHVDYTLNTFEGGGYERTWCYVTSPPDCPGESPYIPEGFKTDNTLPEWEALGAAWKECYDGYRCEAWWGGLEGSPDGEPVVLDAPLDWPDCCALCS----GSGSXXXXXXXTT-STCVAWSFDPSTGSCQRMSTVAEPSYDYSWGAWNSNNTISGYPGYFEAPLTDCWGRSQYDLCVNTNAAFIIPGVIVAFISLCCMWASGFCAPSARAGLLRELAIEQPQSSRLVKVACAEVACTKTVKSTGKGGTKITYTYNGTFVTRDGAVFNLPPPTRRPKMHEASRRIEKRMLSVLHNTKRNPRADPSLARRCETPDGLRAEFSKMVRAVPRKPEASRSGGSFYRSHVLGHPNVPVERDAAVDHRFDCILLVGT------EEPGRTPTKVLLVGILGEDRITCVGEDVLGASVADFCCASFCFVLAAALLFIMCITLLTNEAAQNMAAWTFEGDHRVGAIIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLV 511          
BLAST of mRNA_P-fluviatile_contig6.12474.1 vs. uniprot
Match: A0A6H5KRC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC3_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.140e-114
Identity = 211/459 (45.97%), Postives = 257/459 (55.99%), Query Frame = 0
Query:   71 VTSPPHCPGESPYIPEGFKTKNTLPEWEEDGAAWKECYDGYRCEAWWGSLEGSPDGEPVVLDAPLDWPDCCALCSDSNGGGGDGTAGEKPTTGAACVGWSFDPSTGSCQRMSAVESVSRDLSWSV---NSTVHGYPGYFEAPLDDCWGRTQYDLCANTNVAFIASGMLVAFFSLPCFWFLFIRRLSKSTGLLRELIADPDSRLVKAACEQVTGTTSVEYTGKGARTVKHRYSGTFITSDGALLVVPPTPTLLINT-EDGRDAEKNMLKVLFFTNLDPRADPLVTNECGTRDEIRSAFSTLLKAAKGREKRRTKKAINTISSSSTDRRFDCRLLVGTPRGGEYSRRGSTTSEALLVGILGEDQITCGFNNTLQEHPVQYAITFCCLALAISLLVILCVTLLTNDASQHMAAYTFEGDFEIGAVVGLVLLVSFPVLLCAWRLRLIRSNSRLITECPRVETD 525
            VTSPP CPG+S YIPEGFKT NTLPEWE++GAAWKE +D  RC+AWWG L GSP+GEPVVLDAPLDWPDCCALCS    GGGD       TT   C  WSFDPSTGSCQRMSAVES S++ +W       TV GYPGYFEAP++DCW R +YDLC N ++  I  GM VAF+S+ C +F                            C+++      + +GKG     + Y GTF   DGAL V+PP PT L N        EK ML+VL+ TNL+PRADP V +  G   +                 +R ++  N I         D R+L                    LVGILGED+ITC  +  L       +    CL LA  +LV +CV LLTN+A+QHMA +TFEGD+ IGAVVGL+L    P L  AW  R      RL+ +CP  E+D
Sbjct:   33 VTSPPDCPGDSLYIPEGFKTDNTLPEWEDEGAAWKE-WD--RCDAWWGGLGGSPNGEPVVLDAPLDWPDCCALCS----GGGDDDGANTETT---CAAWSFDPSTGSCQRMSAVESTSQNNTWGAWQYKGTVKGYPGYFEAPINDCWSRMKYDLCVNPSMGLIVPGMFVAFWSILCMYF-------------------------PVGCQKLA-----QKSGKGGIKYFYTYKGTFAACDGALFVLPP-PTRLSNAPRSSHKIEKRMLRVLYNTNLNPRADPGVASRAGDSCD-----------------KRKRQISNPIVP------HDARVL--------------------LVGILGEDRITCIDHELLGSSSCCRSCASFCLVLAAVMLVTMCVALLTNEAAQHMAEWTFEGDYRIGAVVGLMLRSCVP-LSFAWNYRNSNKLFRLVKDCPVAESD 406          
BLAST of mRNA_P-fluviatile_contig6.12474.1 vs. uniprot
Match: A0A6H5K6X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X7_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.230e-54
Identity = 110/221 (49.77%), Postives = 123/221 (55.66%), Query Frame = 0
Query:   71 VTSPPHCPGESPYIPEGFKTKNTLPEWEEDGAAWKECYDGYRCEAWWGSLEGSPDGEPVVLDAPLDWPDCCALCSDSNGGGGDGTAGEKPTTGAACVGWSFDPSTGSCQRMSAVESVSRDLSWSV---NSTVHGYPGYFEAPLDDCWGRTQYDLCANTNVAFIASGMLVAFFSLPCFWFLFIRRLSKSTGLLRELIADPD----------SRLVKAACEQV 278
            VTSPP  PGESPYIPEGFKT NTLP  E +GAAWKECYDG RC+AWWG LEGSPDGEPVVLDAPLDWPDCCALC+      GDG+      T + CV WSFDPSTG CQRM  VE  S D SW+    ++T++G           C G      CA +  A                            GLLREL  +            SRLVKAAC +V
Sbjct:   13 VTSPPDFPGESPYIPEGFKTDNTLPLREANGAAWKECYDGNRCDAWWGGLEGSPDGEPVVLDAPLDWPDCCALCNGGGDNDGDGSG-----TNSTCVAWSFDPSTGWCQRMPTVEETSYDYSWTTWQNSNTINGLM------CMHCLG-----FCARSTRA----------------------------GLLRELAVEQQQSSPIEQPQSSRLVKAACVKV 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDN9_ECTSI2.400e-18656.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRC3_9PHAE2.140e-11445.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6X7_9PHAE1.230e-5449.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 444..466
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..443
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 507..535
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 467..485
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 486..506
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 482..504
NoneNo IPR availableTMHMMTMhelixcoord: 445..467

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1475072..1478213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12474.1mRNA_P-fluviatile_contig6.12474.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1474463..1479177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12474.1 ID=prot_P-fluviatile_contig6.12474.1|Name=mRNA_P-fluviatile_contig6.12474.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=536bp
MAWRFSSHAEGVYAGRTMTGITAACTCSVDGRSGTADTSRYNGYSFTGCG
AHVDYTYELSGGGYERIWCYVTSPPHCPGESPYIPEGFKTKNTLPEWEED
GAAWKECYDGYRCEAWWGSLEGSPDGEPVVLDAPLDWPDCCALCSDSNGG
GGDGTAGEKPTTGAACVGWSFDPSTGSCQRMSAVESVSRDLSWSVNSTVH
GYPGYFEAPLDDCWGRTQYDLCANTNVAFIASGMLVAFFSLPCFWFLFIR
RLSKSTGLLRELIADPDSRLVKAACEQVTGTTSVEYTGKGARTVKHRYSG
TFITSDGALLVVPPTPTLLINTEDGRDAEKNMLKVLFFTNLDPRADPLVT
NECGTRDEIRSAFSTLLKAAKGREKRRTKKAINTISSSSTDRRFDCRLLV
GTPRGGEYSRRGSTTSEALLVGILGEDQITCGFNNTLQEHPVQYAITFCC
LALAISLLVILCVTLLTNDASQHMAAYTFEGDFEIGAVVGLVLLVSFPVL
LCAWRLRLIRSNSRLITECPRVETDLHAQAADRVL*
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