prot_P-fluviatile_contig6.12464.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12464.1
Unique Nameprot_P-fluviatile_contig6.12464.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length263
Homology
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: D8LGR2_ECTSI (Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR2_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.600e-121
Identity = 196/293 (66.89%), Postives = 220/293 (75.09%), Query Frame = 0
Query:    1 MEEEDPGPVIREMRVQIRPPSEQGSRGCRRIRRLGKVPGIVYSNND-----------AGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAE-GVSIKVQESPAGD---REGAEGAAKSDAG------------ERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKKVFAS-DS---DDEEGGVDDEV 262
            MEEED GP+IREMRVQ+RP  E GSRG RRIRR GKVPG+VYSN+D            G   +D I VKVDKIVLDRE+RRL  SFDNTVYDLVIEG     +D A+ G+ + V +  AG    +E  EG +  + G            ERRELVLANQSRLHPVFRTLLSVNWIRYKAGR+YPIPIKFIN DLN++FR+GAYIRRLKTHQHI+LPEDPE VPKWLYLDLEFVRSGSKLRVSD+MMPEG  LHR NE  +WNEVVCTIKG+KVFAS DS   D++E  VDDE 
Sbjct:    1 MEEEDSGPIIREMRVQVRPRGEYGSRGARRIRRAGKVPGVVYSNSDNRGHSSRPGGGVGRPADDPILVKVDKIVLDREVRRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTVTDPGAGGDRGKEEEEGVSAGEGGVEGXXXXXXXXPERRELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINSDLNENFRKGAYIRRLKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLHRANEPGMWNEVVCTIKGRKVFASGDSAGDDEDEVFVDDEA 293          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A485LRJ8_9STRA (Aste57867_24188 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.400e-17
Identity = 67/231 (29.00%), Postives = 107/231 (46.32%), Query Frame = 0
Query:   16 QIRPPSEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEG-TRLHRGNEASIWNEVVCTIKGKK 245
            ++RP  + GSR  RR+R  G +PGIVY     G   + L  V ++++  +RE R+L  S  N VY++ +    P         +IKV                          L     LHPV    L+VN++RYK GR+  IP+ ++N + +   +RG YI  ++    I      E++P  L++D+  +  G ++ + +I  PEG T L +         VV TI GK+
Sbjct:   30 ELRPRLKDGSRESRRLRNQGLLPGIVYGEGITGDATKLL--VSMNQVDFEREYRKLRTSMGNQVYEVSVGESSP---------TIKV--------------------------LLRDVTLHPVTDVPLTVNFLRYKPGRKVHIPLDYLNTEGSPGLKRGGYINNVR--HDIPCTIASEEIPAKLFVDVNGMHVGERIYLENITFPEGVTPLVKAKS------VVATIAGKR 215          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A3R6YZB1_9STRA (Ribosomal_TL5_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZB1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.770e-17
Identity = 64/230 (27.83%), Postives = 103/230 (44.78%), Query Frame = 0
Query:   17 IRPPSEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEG-TRLHRGNEASIWNEVVCTIKGKK 245
            + P  + GSR  RR+R+ G +PGI+Y     G  +   + V ++++  +RE R+L  S  N VY++    G P+ +                                   VL   + LHPV     SVN++RYK GR+  IP+ F+N + +   +RG YI  +  +  I      E +P  L++D+  +  G ++ + DI  PE  T L +         VV TI GK+
Sbjct:   29 LTPRLKDGSRESRRLRKQGLLPGILYGEGTNG--DSTRVLVSMNQVDFEREYRKLRTSMGNQVYEVSTGEGGPVTK-----------------------------------VLLRDATLHPVTDVPQSVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINNV--YHEIPCTIASEAIPTKLFVDVNGMHVGQRIYLEDITFPEHVTPLVKAKA------VVATIAGKR 213          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A6G0XNP1_9STRA (Ribosomal_TL5_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNP1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.510e-16
Identity = 62/240 (25.83%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   15 VQIRPPSEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKKVFASDSDDE 254
            +Q+ P  + GSR  RR+R+ G +PGI+Y     G   + L+ +K  ++  +RE R+L  S  N VY++ +    P+ +                                   VL     L PV    L+VN++RYK GR+  IP+ ++N + +   +RG YI  ++    I      E++P  LY+D+  +  G ++ + +I  PE  +     ++     VV TI GK+      ++E
Sbjct:   33 IQLVPRLKDGSRESRRLRKEGLLPGILYGEGSNGDSSKVLVSMK--QVDFEREYRKLRTSMGNQVYEVSVGDNGPVTK-----------------------------------VLLRDVTLDPVTDVPLTVNFLRYKPGRKVYIPLDYLNMEGSPGLKRGGYINNVR--HEIPCTISSEEIPAKLYVDVNGMHVGERIYLENITFPEHVKPLIKEKS-----VVATIAGKRGLIQKPEEE 228          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A397C844_9STRA (Ribosomal_TL5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C844_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.250e-16
Identity = 65/229 (28.38%), Postives = 102/229 (44.54%), Query Frame = 0
Query:   17 IRPPSEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKK 245
            + P  + GSR  RR+R+ G +PGI+Y     G  +   + V ++++  +RE R+L  S  N VY++    G P                          A K         VL   + LHPV     SVN++RYK GR+  IP+ F+N + +   +RG YI  +  +  I      E +P  LY+D+  +  G ++ + +I  PE        E+     VV TI GK+
Sbjct:   30 LTPRLKDGSREARRLRKQGLLPGILYGEGVNG--DASRVLVSMNQVDFEREYRKLRTSMGNQVYEVTTGDGGP--------------------------ATK---------VLLRDATLHPVTDIPQSVNFLRYKPGRKVHIPLDFLNQEGSPGLKRGGYINNV--YHEIPCTIASEVIPAKLYVDVNGMHVGERIYLENITFPEHVTPLVKPES-----VVATIAGKR 214          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: F0WKB2_9STRA (50S ribosomal protein L25 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-15
Identity = 56/202 (27.72%), Postives = 93/202 (46.04%), Query Frame = 0
Query:   21 SEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEG 222
            ++ GSR  R++R+ G +PG++Y     G  ++  + V ++K + DR  R+L  S DN V+ + ++   PI                                    L +    + HPV    L+VN+IRYK GR+  IPI +IN + +   +RG YI  +  +  +    + EQVPK L +D+  +   SK  +  I  P+G
Sbjct:   45 TQDGSRAARKLRKKGYLPGLLYGEGMNG--DDTKVLVSLEKKLFDRLHRKLWTSIDNQVFKVQVKDQPPI------------------------------------LAIMRDVQFHPVTDIPLTVNFIRYKNGRKVSIPITYINEEGSPGIKRGGYINHI--YHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDG 206          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A024G2B8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.680e-15
Identity = 64/228 (28.07%), Postives = 100/228 (43.86%), Query Frame = 0
Query:   21 SEQGSRGCRRIRRLGKVPGIVYSNNDAGAKEEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSIKVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKKVFA 248
            ++ GSR  R++R+ G +PGI+Y     G   + LI +K  K + DR  R+L  S DN V+ + +E   P+                                    L +    + HPV    L+VN+IRYK GR+  IPI +IN + +   +RG YI  +       +  D  QVPK L +D+  +   SK  +  I  P+G        A     ++  IKG+++ A
Sbjct:  757 TQDGSRASRKLRQKGMLPGILYGEGMDGDDNKVLISLK--KTLFDRLHRKLWTSIDNQVFKVQVEDQPPV------------------------------------LAIMRDVQFHPVTDLPLTVNFIRYKHGRKVSIPITYINEEGSPGLKRGGYINHICHEVECYVNTD--QVPKTLEIDVNGLDVDSKFFLETISFPDGIV-----PAVPAGTLLANIKGRRIQA 939          
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Match: A0A482RSQ9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSQ9_9ARCH)

HSP 1 Score: 55.1 bits (131), Expect = 2.750e-6
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0
Query:  142 LLSVNWIRYKAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLYLDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKK 245
            +LSVN++RY+AG    IPI+    D +   +RG Y+  +K     ++ E    VP+ L LDL     G   RV+++ +P   R  RG +    + VV  IK  K
Sbjct:    5 ILSVNFLRYRAGVSLRIPIELRAADQSPDIKRGGYVVPVKPFLSCVVQEGAA-VPRSLPLDLSGALKGQVFRVANLSLPPCVRPARGEDG---DRVVAVIKAAK 104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LGR2_ECTSI1.600e-12166.89Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus... [more]
A0A485LRJ8_9STRA2.400e-1729.00Aste57867_24188 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R6YZB1_9STRA8.770e-1727.83Ribosomal_TL5_C domain-containing protein n=2 Tax=... [more]
A0A6G0XNP1_9STRA2.510e-1625.83Ribosomal_TL5_C domain-containing protein n=1 Tax=... [more]
A0A397C844_9STRA6.250e-1628.38Ribosomal_TL5_C domain-containing protein n=4 Tax=... [more]
F0WKB2_9STRA2.100e-1527.7250S ribosomal protein L25 putative n=1 Tax=Albugo ... [more]
A0A024G2B8_9STRA3.680e-1528.07Cleavage and polyadenylation specificity factor su... [more]
A0A482RSQ9_9ARCH2.750e-633.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029751Ribosomal protein L25PFAMPF01386Ribosomal_L25pcoord: 16..86
e-value: 2.3E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR33284:SF1RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 14..246
NoneNo IPR availablePANTHERPTHR33284FAMILY NOT NAMEDcoord: 14..246
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 13..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1347311..1352266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12464.1mRNA_P-fluviatile_contig6.12464.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1346952..1352998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12464.1 ID=prot_P-fluviatile_contig6.12464.1|Name=mRNA_P-fluviatile_contig6.12464.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=263bp
MEEEDPGPVIREMRVQIRPPSEQGSRGCRRIRRLGKVPGIVYSNNDAGAK
EEDLIPVKVDKIVLDREIRRLGVSFDNTVYDLVIEGGMPIEEDDAEGVSI
KVQESPAGDREGAEGAAKSDAGERRELVLANQSRLHPVFRTLLSVNWIRY
KAGRRYPIPIKFINHDLNDSFRRGAYIRRLKTHQHIILPEDPEQVPKWLY
LDLEFVRSGSKLRVSDIMMPEGTRLHRGNEASIWNEVVCTIKGKKVFASD
SDDEEGGVDDEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029751Ribosomal_L25
IPR011035Ribosomal_L25/Gln-tRNA_synth