prot_P-fluviatile_contig6.12429.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12429.1
Unique Nameprot_P-fluviatile_contig6.12429.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length75
Homology
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BLAST of mRNA_P-fluviatile_contig6.12429.1 vs. uniprot
Match: A0A6H5L7D6_9PHAE (4F5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.230e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 
Query:    1 MARGNQRDRDRLKNQAREAKKGGKSKEGCPRARQERDAQAMREK 44
            MARGNQRDRDRLK QA+EAKKGGKSKEGCPRARQERDAQAMREK
Sbjct:    1 MARGNQRDRDRLKAQAKEAKKGGKSKEGCPRARQERDAQAMREK 44
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7D6_9PHAE1.230e-1695.454F5 domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..72
IPR007513Uncharacterised protein family SERF, N-terminalPFAMPF044194F5coord: 1..25
e-value: 1.4E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1019648..1023695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12429.1mRNA_P-fluviatile_contig6.12429.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1019648..1023695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12429.1 ID=prot_P-fluviatile_contig6.12429.1|Name=mRNA_P-fluviatile_contig6.12429.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=75bp
MARGNQRDRDRLKNQAREAKKGGKSKEGCPRARQERDAQAMREKQARKAA
EKEAAEKEAKEAADAAAAAAAARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007513Uncharacterised_SERF_N