prot_P-fluviatile_contig6.12427.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12427.1
Unique Nameprot_P-fluviatile_contig6.12427.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length556
Homology
BLAST of mRNA_P-fluviatile_contig6.12427.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 5.710e-98
Identity = 321/562 (57.12%), Postives = 380/562 (67.62%), Query Frame = 0
Query:    1 MNSAQETHINLVRLLEATERLISAAGEPSADRNWRDWPRFCQFIAALGTAQSQLQAKVAEAARGGGGSLPAPAAPSAKDLLDYERRLEILRRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTRGHSEAVPDKETPALLPRNGKNQREANPANGXXXXXXXXXXXXXXXXXXXXXXQEADEAEADQVAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVAERLRKKRAAMFASWCMIVTVLITFFATYALVILPFEKRRGPFVAPRSVTFVQAAEQSQHAASQQHDVAG-------AEEVRQRAERAYREASRRARSEQESANSGHRVAQAEKEAFRSRQAKRMMTGSKGRRTAMGDGAMDRKTADIETEGQRDYEGWKQEEVEGGEEGDEGNELSSGSCSAPPPSDDDGAVASGVAXXXXXXXXXXXXXXXXXSGSSSVSHDCATSTREEVGTADDAAYKIDPGIXXXXXXTSAEAAKHYQRRAHLEYEERARREAETSTAMKEVFQLVAEEKEKSRERQA 555
            M S  E H+ LVRLL ATERL+ AAGEPSA  +W +WPRFCQFI +L + QSQLQA+VAE +RG G  L +PA P+A+DL DY+RRLEILRRKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXX + ADEAEADQVAQEISSMAGRLKESS+AINQTLRTQTQVLEDTGDAATQNVDRVKRENARV+ERLRKKRAAMFASWCM++TV++TFFATY LVI+PFEKRRGPFVA R+  F QAAE  +   S+ HD A        AEE+++RA+ AYRE +RRAR   E  N+ HRVA+ EKEAFR RQA+RMM  ++ R+ AM   +  ++T +  T+    +   +QEE  G EEG    +   GSCSAPPP+  + +    VA XXXXXXXX        + +               G     A +  P           + A+ ++RRA+  YEER+RRE E   +     +LVAEEKEK +++ A
Sbjct:    1 MPSVHEIHVELVRLLSATERLV-AAGEPSASGSWENWPRFCQFITSLDSTQSQLQARVAEVSRGAGAGL-SPALPTAEDLADYDRRLEILRRKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXERAADEAEADQVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITVVVTFFATYFLVIVPFEKRRGPFVAARTSAFAQAAEPRERIPSE-HDAAATAAGAATAEEIQRRAQEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRKAAMKKNSQ-QETLEAGTDSVPQH---RQEE--GAEEGQVVTQA--GSCSAPPPASGEDSSGGAVALXXXXXXXXPDEDGDATAAAXXXXXXXXXXXAAXXGAGAAGAAEASPAQPVL------DPAEEHRRRANQAYEERSRRETENLKSTNAGLRLVAEEKEKHQQQXA 534          
BLAST of mRNA_P-fluviatile_contig6.12427.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 7.560e-92
Identity = 308/599 (51.42%), Postives = 370/599 (61.77%), Query Frame = 0
Query:    1 MNSAQETHINLVRLLEATERLISAAGEPSADRNWRDWPRFCQFIAALGTAQSQLQAKVAEAARGGGGSLPAPAAPSAKDLLDYERRLEILRRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTRGHSEAVPDKETPALLPRNGKNQREANPAN-GXXXXXXXXXXXXXXXXXXXXXXQEADEAEADQVAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVAERLRKKRAAMFASWCMIVTVLITFFATYALVILPFEKRRGPFVAPRSVTFVQAAEQSQHAASQQHDVAGA------EEVRQRAERAYREASRRARSEQESANSGHRVAQAEKEAFRSRQAKRMMTGSKGRRTAMGDGAMDRKTADIETEGQRDYEGWKQEEVEGGEEGDEGNELSSGSCSAPPP-SDDDGAVASGVAXXXXXXXXXXXXXXXXXSGSSSVSH-----DCATSTREEVG-------------------------TADDAAYKIDPGIXXXXXXTS------AEAAKHYQRRAHLEYEERARREAETSTAMKEVFQLVAEEKEKSRERQA 555
            M SA E H++LVRLL ATERL+ AAGEPSAD +W  WPRFCQFI  L + QSQLQAKVAE +RG G  L +PA+P+A+DL DY+RRLEILRRKR    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          G R     V  +E  A     G+N ++++  + G        XXXXXXXXXXXXXX          VAQEISSMAGRLKESS+AINQTLRTQTQVLEDTGDAA QNV RVKRENARV+ERLRKKRAAMFASWCM++TV+ TFFATY LVI+PFEKRRGPFV  R+  F QAAE  +   SQ   VA A      EE+++RA+ AYRE +RRAR   E  N+ HRVA+ EKEAFR RQA+RMM  ++ R+ AM   +  +KT +  T+    +        EG E G    +     CSAPPP SD+D +  +G    XXXXXXXXX      +GS +        D  T+   E                            A D   +  P +       +      A + + ++RRA+  YEER+RRE E   +     +LVAEEKEK R++QA
Sbjct:    1 MQSAHEIHVDLVRLLSATERLV-AAGEPSADGSWEHWPRFCQFITWLDSTQSQLQAKVAEVSRGAGAGL-SPASPAAEDLADYDRRLEILRRKRDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAIFTPREDGDR----VVRRRE--ARGSSRGRNTKDSSQDDSGGVFGGRRRXXXXXXXXXXXXXXXXXXXXXXXXVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITVVATFFATYFLVIMPFEKRRGPFVTARTSAFAQAAEPRERIPSQHEHVATAAGAATAEEIQRRAQEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRKAAMKKNSQ-QKTLEAGTDSVPQHR-----REEGAEVGQVNTQAVR--CSAPPPASDEDSSGGAGAFGSXXXXXXXXXGDAKASAGSCTXXXXXXXDDDVTAAAAEXXXXXXXXXDSAEAAGXXXXXXXXXXXAAADTTDQTVPAVGGTEASAAQPVLDPAASVEEHRRRANQAYEERSRRETENQDSTNAGLRLVAEEKEKYRQQQA 583          
BLAST of mRNA_P-fluviatile_contig6.12427.1 vs. uniprot
Match: A0A835YQ05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ05_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.300e-10
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
Query:  225 MAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVAERLRKKRAAMFASWCMIVTVLITFFATYALVILPFEKRRGPFVAPRS 307
            M IN+TL+TQT +LEDT   A +N+ +V RE  RVA +LRKKR A  AS  +I+TVL+TF ATYA VI  F KRR  F   +S
Sbjct:  719 MEINRTLKTQTALLEDTETVAAKNLSKVMREAERVAVQLRKKRRATCASCTVILTVLLTFMATYAFVIKAFSKRRSIFEIVKS 801          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHQ2_ECTSI5.710e-9857.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6N4_9PHAE7.560e-9251.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQ05_9STRA2.300e-1055.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..354
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableCOILSCoilCoilcoord: 249..269
NoneNo IPR availableGENE3D1.20.5.110coord: 195..264
e-value: 1.1E-7
score: 33.7
NoneNo IPR availablePANTHERPTHR13050:SF7VESICLE TRANSPORT PROTEIN USE1coord: 4..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 296..555
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..295
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 199..259
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
IPR019150Vesicle transport protein, Use1PFAMPF09753Use1coord: 207..286
e-value: 1.9E-12
score: 47.4
IPR019150Vesicle transport protein, Use1PANTHERPTHR13050USE1-LIKE PROTEINcoord: 4..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:993826..1002253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12427.1mRNA_P-fluviatile_contig6.12427.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 993772..1002641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12427.1 ID=prot_P-fluviatile_contig6.12427.1|Name=mRNA_P-fluviatile_contig6.12427.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=556bp
MNSAQETHINLVRLLEATERLISAAGEPSADRNWRDWPRFCQFIAALGTA
QSQLQAKVAEAARGGGGSLPAPAAPSAKDLLDYERRLEILRRKRDDLASA
AAAAAAAATAAGNQPSRRRQNDSSFSGGRSTSGGTDARNNTGGGTRGHSE
AVPDKETPALLPRNGKNQREANPANGGGGGSVLGGHRNAGGGGRGGGGQE
ADEAEADQVAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVD
RVKRENARVAERLRKKRAAMFASWCMIVTVLITFFATYALVILPFEKRRG
PFVAPRSVTFVQAAEQSQHAASQQHDVAGAEEVRQRAERAYREASRRARS
EQESANSGHRVAQAEKEAFRSRQAKRMMTGSKGRRTAMGDGAMDRKTADI
ETEGQRDYEGWKQEEVEGGEEGDEGNELSSGSCSAPPPSDDDGAVASGVA
GSCSAPPPSGDNGDTSSSGSSSVSHDCATSTREEVGTADDAAYKIDPGID
PGIDPTSAEAAKHYQRRAHLEYEERARREAETSTAMKEVFQLVAEEKEKS
RERQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019150Vesicle_transport_protein_Use1