prot_P-fluviatile_contig6.12425.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12425.1
Unique Nameprot_P-fluviatile_contig6.12425.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length155
Homology
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: D7FHU1_ECTSI (Glycyl-tRNA Synthetase (C-terminal region) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHU1_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 1.850e-97
Identity = 138/154 (89.61%), Postives = 147/154 (95.45%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEINGY 154
            MEYFDER+K+KYVPHVIEPSLGVDRLFLA+MVSAYHEDEVGG+KRTLLRFHPRMAPIKVAVFPLVKNKPELM KAR IYE+IRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDF+TLEGDGTVTVRERDSTEQ R+  D+LL +LSK INGY
Sbjct:    1 MEYFDERSKTKYVPHVIEPSLGVDRLFLAVMVSAYHEDEVGGDKRTLLRFHPRMAPIKVAVFPLVKNKPELMEKARGIYETIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFETLEGDGTVTVRERDSTEQTRVPADELLGFLSKAINGY 154
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A7S0I0N9_9EUKA (Glycine--tRNA ligase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0N9_9EUKA)

HSP 1 Score: 230 bits (587), Expect = 2.520e-74
Identity = 108/153 (70.59%), Postives = 133/153 (86.93%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEING 153
            MEYFD+  K KYVPHVIEPS+GVDRL LA++ SAY  DEVGGEKRT+L+FHPR+APIKVAVFPL+KNKPEL++KA +++  ++ R++  +D +GAIGRRYRRMDEAGTPFCVT+DFDTLEGDGTVT+RERDSTEQ+RI   +LL YL ++I G
Sbjct:   74 MEYFDDALKEKYVPHVIEPSIGVDRLMLAVLTSAYCTDEVGGEKRTVLKFHPRLAPIKVAVFPLLKNKPELVAKATELHAKLQRRYHVAYDATGAIGRRYRRMDEAGTPFCVTIDFDTLEGDGTVTLRERDSTEQRRIAIPELLEYLEEQIEG 226
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.850e-74
Identity = 119/167 (71.26%), Postives = 136/167 (81.44%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDE-------------VGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEINGY 154
            MEYFDE TK KYVPHVIEPSLGVDRLFLA++ SAYHEDE             VGGEKRTLLRFHP +APIKVAVFPLVKNKPELM+KA  +Y+ + +R+N FWDV+GAIGRRYRRMDEAGTPFC+TVDFDTLE D TVTVR+RDSTEQ R+   D++ YL K ++GY
Sbjct:  344 MEYFDEATKRKYVPHVIEPSLGVDRLFLALLTSAYHEDEASSARHLNGACLHVGGEKRTLLRFHPAIAPIKVAVFPLVKNKPELMAKAEGLYKQLSMRYNCFWDVAGAIGRRYRRMDEAGTPFCITVDFDTLEDD-TVTVRDRDSTEQVRMPMADVIPYLDKAVHGY 509
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: W7TM99_9STRA (Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM99_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.090e-73
Identity = 115/153 (75.16%), Postives = 131/153 (85.62%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEING 153
            MEYFDE  K +YVPHVIEPS+GVDRLFLA++ SAY EDE+ GEKR +L+FHP MAPIKV VFPLVKNKPE+M KAR IY+ ++ R+N FWDVSGAIGRRYRRMDEAGTPFC+TVDFDTLE D +VTVRERDST Q R+  DDLLA+  KEING
Sbjct:  431 MEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDD-SVTVRERDSTRQTRMKVDDLLAFFDKEING 582
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.130e-70
Identity = 112/154 (72.73%), Postives = 134/154 (87.01%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEINGY 154
            +EY  E TK K++PHVIEPSLGVDRL LA++ SAYH+DEVGGE+RTLLRFHPR+APIK AVFPLVKNKPELM KAR ++ +++ R+N  WDVSGAIGRRYRR DEAGTPFC+TVDFDTLE D TVTVRERD+TEQ R+  D++ AYLSK+I+G+
Sbjct:  344 LEYQVEGTKDKFLPHVIEPSLGVDRLLLALICSAYHKDEVGGEQRTLLRFHPRIAPIKAAVFPLVKNKPELMEKARGLFLTLQKRYNVAWDVSGAIGRRYRRADEAGTPFCITVDFDTLE-DNTVTVRERDTTEQLRMSIDEVPAYLSKQIDGF 496
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A7S1GSR2_HEMAN (Glycine--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GSR2_HEMAN)

HSP 1 Score: 221 bits (563), Expect = 2.990e-69
Identity = 106/154 (68.83%), Postives = 129/154 (83.77%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEINGY 154
            +EY D   K KYVPHVIEPS+GVDRLFLA++ SAY ED VGGE R+++RF P +APIK A+ PLVKNKPEL+ KAR+IY  +++R+N  WD  GAIGRRYRRMDE GTPFCVTVDFDTLE DGTVTVR+RD+TEQQR+  D+L ++LSKEI+G+
Sbjct:  181 IEYNDVEAKRKYVPHVIEPSIGVDRLFLALVCSAYDEDTVGGEVRSVMRFTPAIAPIKCAILPLVKNKPELLEKAREIYNKLQMRYNVVWDQGGAIGRRYRRMDEVGTPFCVTVDFDTLE-DGTVTVRDRDTTEQQRLTIDELYSFLSKEIDGF 333
[Close]
BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A1Z9IHR3_9BACT (Glycine--tRNA ligase n=1 Tax=Opitutales bacterium TMED158 TaxID=1986794 RepID=A0A1Z9IHR3_9BACT)

HSP 1 Score: 224 bits (571), Expect = 1.640e-68
Identity = 103/151 (68.21%), Postives = 132/151 (87.42%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEI 151
            ME FDE TK+KYVPHVIEPSLGVDR+ LAI+ +AY EDEVGGEKR+LL+F+PR+AP KVAV PL+KNKPEL+ +AR IY+ ++ + N FWDVSGAIGRRYRRMDE GTP+CVT+DFDT+E DGTVT+R+RD+TEQ+R+  ++L A+L +++
Sbjct:  352 MEIFDEATKTKYVPHVIEPSLGVDRVLLAILTAAYCEDEVGGEKRSLLKFNPRIAPYKVAVLPLLKNKPELVERARGIYDKLQRKFNCFWDVSGAIGRRYRRMDEIGTPWCVTIDFDTIEKDGTVTLRDRDTTEQKRVSEEELFAFLDEQL 502
[Close]
BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A3D4HFJ2_9BACT (Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HFJ2_9BACT)

HSP 1 Score: 218 bits (554), Expect = 2.440e-68
Identity = 103/152 (67.76%), Postives = 129/152 (84.87%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEIN 152
            MEYFDE    +Y+PHVIEPSLGVDR FLA++ +AY EDE+ GEKR LLRFHPRMAPIK AV PLVKNKPELM  A+K+Y+ ++   N F+DVSGAIGRRYRRMDE GTP+C+T+DFDTLE DGTVT+R+RD+T+Q+R+  +DLLA+L++ I+
Sbjct:  147 MEYFDEGRGERYIPHVIEPSLGVDRTFLALICAAYAEDEIDGEKRALLRFHPRMAPIKAAVLPLVKNKPELMEIAQKLYKRLQRHWNVFFDVSGAIGRRYRRMDEIGTPYCITIDFDTLE-DGTVTLRDRDTTKQERLSEEDLLAFLTQHID 297
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BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A2E4ZW83_9BACT (Glycine--tRNA ligase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E4ZW83_9BACT)

HSP 1 Score: 223 bits (568), Expect = 4.180e-68
Identity = 106/153 (69.28%), Postives = 128/153 (83.66%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEING 153
            MEYFDE  K KYVPHVIEPSLGVDR  LA++ +AY  DE+ GE RT++RFHPR+APIKV VFPLVKNKP L+ KAR+I+E +R R N F+D SGAIGRRYRRMDEAG PF VT+DF+TLEGDGTVT+R+RDST+Q+R+  ++LLA LS+ I G
Sbjct:  347 MEYFDEERKEKYVPHVIEPSLGVDRTLLAVLCAAYDVDEIEGETRTVMRFHPRVAPIKVGVFPLVKNKPPLVEKAREIFEKLRSRWNVFYDASGAIGRRYRRMDEAGAPFGVTIDFETLEGDGTVTLRDRDSTKQERLSEEELLACLSERIEG 499
[Close]
BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Match: A0A7S2UL72_9STRA (Glycine--tRNA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL72_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.410e-68
Identity = 107/154 (69.48%), Postives = 126/154 (81.82%), Query Frame = 0 
Query:    1 MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRFHPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRYRRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKEINGY 154
            ++YFD+ TK KYVPH IEPSLGVDRL LA++ SAY EDEVGGEKR  L+FHP +APIKV+V PLVKNK  L+S AR +YE ++ R N  WD SGAIGRRYRR DE GTPFC+TVDFDT+E DG VTVR+RDSTEQ RI  DDL+ YLS++I+GY
Sbjct:  426 LDYFDDATKEKYVPHCIEPSLGVDRLILALICSAYAEDEVGGEKRNFLKFHPSVAPIKVSVLPLVKNKEALVSVARDLYEKLQKRWNVSWDASGAIGRRYRRADEIGTPFCITVDFDTIETDGAVTVRDRDSTEQVRIKMDDLIPYLSEQIDGY 579
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU1_ECTSI1.850e-9789.61Glycyl-tRNA Synthetase (C-terminal region) n=2 Tax... [more]
A0A7S0I0N9_9EUKA2.520e-7470.59Glycine--tRNA ligase n=1 Tax=Phaeocystis antarctic... [more]
A0A835YRJ7_9STRA2.850e-7471.26Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
W7TM99_9STRA1.090e-7375.16Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6U1N9R4_9STRA1.130e-7072.73Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1GSR2_HEMAN2.990e-6968.83Glycine--tRNA ligase n=1 Tax=Hemiselmis andersenii... [more]
A0A1Z9IHR3_9BACT1.640e-6868.21Glycine--tRNA ligase n=1 Tax=Opitutales bacterium ... [more]
A0A3D4HFJ2_9BACT2.440e-6867.76Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae b... [more]
A0A2E4ZW83_9BACT4.180e-6869.28Glycine--tRNA ligase n=1 Tax=Opitutae bacterium Ta... [more]
A0A7S2UL72_9STRA4.410e-6869.48Glycine--tRNA ligase n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002315Glycyl-tRNA synthetasePRINTSPR01043TRNASYNTHGLYcoord: 96..115
score: 71.94
coord: 14..26
score: 64.53
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 54..152
e-value: 2.6E-34
score: 119.6
NoneNo IPR availableGENE3D3.30.930.10coord: 1..53
e-value: 1.2E-16
score: 62.8
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 1..152
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 45..153
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 3..61
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 58..149
e-value: 2.8E-21
score: 75.5
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 1..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:977724..980657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12425.1mRNA_P-fluviatile_contig6.12425.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 977724..980657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12425.1 ID=prot_P-fluviatile_contig6.12425.1|Name=mRNA_P-fluviatile_contig6.12425.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=155bp
MEYFDERTKSKYVPHVIEPSLGVDRLFLAIMVSAYHEDEVGGEKRTLLRF
HPRMAPIKVAVFPLVKNKPELMSKARKIYESIRLRHNAFWDVSGAIGRRY
RRMDEAGTPFCVTVDFDTLEGDGTVTVRERDSTEQQRIHPDDLLAYLSKE
INGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002315tRNA-synt_gly
IPR036621Anticodon-bd_dom_sf
IPR004154Anticodon-bd
IPR027031Gly-tRNA_synthase/POLG2