prot_P-fluviatile_contig6.12383.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12383.1
Unique Nameprot_P-fluviatile_contig6.12383.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length499
Homology
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BLAST of mRNA_P-fluviatile_contig6.12383.1 vs. uniprot
Match: A0A6H5JYP4_9PHAE (Myb_DNA-bind_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP4_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.000e-92
Identity = 174/211 (82.46%), Postives = 186/211 (88.15%), Query Frame = 0 
Query:   48 KAKGKEQLKELTAEEVATMKISDFCTKYKSRLPPKPKEKGVKEKAVK--AADAARXXXXXXXXXXXXXXAPPKQSMKVVFKDGKLVVNDADLIVEGASSIDDENREEVDEDESTAATASSFTNRELPIRWKPHDVIKFYRGIQMYNLSFDQMSKMLFKGERSQKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFSEDPPAVPDFEADSK 256
            K K KE+LKELTAEEVATMKI+DFCT YKSRLPPKPK+KG KEKAVK  AADAAR        XXXXXX   KQSMKVVFKDGK VVNDADLIVEGAS IDDENREEVDEDE+TAATASSFTNRE P+RWKPHD+IKFYRGIQMYNLSFDQM+K LF+GER+QKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFS+DPP +P FE + K
Sbjct:  493 KGKDKEKLKELTAEEVATMKIADFCTSYKSRLPPKPKDKGAKEKAVKMKAADAARRKRKALSEXXXXXXXX-KQSMKVVFKDGKFVVNDADLIVEGASGIDDENREEVDEDETTAATASSFTNRETPMRWKPHDIIKFYRGIQMYNLSFDQMAKTLFRGERTQKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFSKDPPPLPTFEPEPK 702
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BLAST of mRNA_P-fluviatile_contig6.12383.1 vs. uniprot
Match: D7FHQ4_ECTSI (Myb_DNA-bind_7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ4_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.770e-70
Identity = 150/177 (84.75%), Postives = 160/177 (90.40%), Query Frame = 0 
Query:   82 KPKEKGVKEKAVK--AADAARXXXXXXXXXXXXXXAPPKQSMKVVFKDGKLVVNDADLIVEGASSIDDENREEVDEDESTAATASSFTNRELPIRWKPHDVIKFYRGIQMYNLSFDQMSKMLFKGERSQKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFSEDPPAVPDFEADSK 256
            K K+K   EKAVK  AADAARXXXXXXXXXXXXXX   KQSMKVVFKDGKLVVNDADLIVEGAS IDDENREEVDEDE+TAATASSFTNRE  +RWKPHD+IKFYRGIQMYNLSFDQM+K LF+GER+QKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFS+DPP +P FE + K
Sbjct:  171 KGKDKDKLEKAVKMKAADAARXXXXXXXXXXXXXXXX-KQSMKVVFKDGKLVVNDADLIVEGASGIDDENREEVDEDETTAATASSFTNRETAMRWKPHDIIKFYRGIQMYNLSFDQMAKTLFRGERTQKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFSKDPPPLPTFEPEPK 346
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JYP4_9PHAE1.000e-9282.46Myb_DNA-bind_7 domain-containing protein n=1 Tax=E... [more]
D7FHQ4_ECTSI1.770e-7084.75Myb_DNA-bind_7 domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableCOILSCoilCoilcoord: 400..420
NoneNo IPR availablePANTHERPTHR22929RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR Bcoord: 53..424
IPR039467Transcription factor TFIIIB component B'', Myb domainPFAMPF15963Myb_DNA-bind_7coord: 165..241
e-value: 3.9E-13
score: 49.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:615584..622278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12383.1mRNA_P-fluviatile_contig6.12383.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 615516..622381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12383.1 ID=prot_P-fluviatile_contig6.12383.1|Name=mRNA_P-fluviatile_contig6.12383.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=499bp
MQAGAAGNAGGAGFRSGEAGGGEPARSDADAGGGVGATREKCNKEKGKAK
GKEQLKELTAEEVATMKISDFCTKYKSRLPPKPKEKGVKEKAVKAADAAR
RRRKALAEAGGAPPAPPKQSMKVVFKDGKLVVNDADLIVEGASSIDDENR
EEVDEDESTAATASSFTNRELPIRWKPHDVIKFYRGIQMYNLSFDQMSKM
LFKGERSQKQLKKKFEKELRNHPEMVHRALRTQINKDHPYFSEDPPAVPD
FEADSKGKSKEKNKTTKEGRGKRVRSSSGSGRGRGGPGTSRPKRRHIAGE
GDAHAGAAAAAAAATTAGEGEDSGWAGQSAPQNKGRKRARAVRDGGGACG
GGVDDDGEGEGEFGFGYGGGSAAAANGGQRPGTAPPGAVAGNKNADGRGK
DREEKWRKGMEEEEEEEEEEAIEGEGGKGSRKRPRRLPRAARHNPHVALS
AVLGDGGGGGGDSDNSSSSSGDCGERIGDDDDGMGPRVAAPSSASVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039467TFIIIB_B''_Myb