prot_P-fluviatile_contig6.12359.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig6.12359.1
Unique Name	prot_P-fluviatile_contig6.12359.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	416

Homology

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BLAST of mRNA_P-fluviatile_contig6.12359.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 5.820e-150
Identity = 274/445 (61.57%), Postives = 318/445 (71.46%), Query Frame = 0

Query:    1 MTELGPRRQLPRGE-DTDLLCVELCSSDQPPVPPVLLPRVSWDGSDERPQEEKEKLEQEGTSKVVLMSNPDQGHEDFLTSVLLKTDAYRPLTTSLRCMEDPDFLDMRGAVVNWFAKVSISYNFDNETVVAALSHFDRYVSLTVTPVNEHVLLQLAAYVALLIASKMSETCPLRMKSLANLTGRMFTPLQV-------------RLAPP-----------------------------PSSAVILSTSSYYLKKARARTCWFRHSPYTLAVAALATAYNSLGLGSLRRRLLKDCDARVRGVTGQGIEIHAVAACADAMDADERAAAXXXATASL--KRGAARCSTESPVCGGGCGGSETVKEGWGSPTGVAQGAAELLQKVAYAAVGSTDFVRGSHVEGVRSGGGGGGVPLVEEFDPPRTFSPCGGAVPTKAVASYVVTAPRLIRR 400
            M+EL   R LPRGE DTDLLCVE+ +  Q PVP   LPRVS DG      +EK+++ ++G++        DQ HE+FLTS+L KT+AYRPL TS + MED +FLDMRGAVVNWFAKVS+SY+F NETVVAALSHFDRYVSLTVTPVN+H+LLQLAAYVALLIASKM ETCPLRM+SLANLTGRMFTPLQV             RLAPP                             P  + +LS SS+YLK+ARARTCWFRH+PYTLAVAALATAYNS+GLG  RRRLL++CDAR R VTG+G+++H VAACADAM  DERAAAXXX         G AR STESPVCGG    +   K+GWGSPTGVAQGA ELLQK A++AVG    VRG   +G+ SGGGG GVPLVE+F P  TFSP  GAV TKAVAS++V   R++RR
Sbjct:    1 MSELS--RLLPRGEEDTDLLCVEVSALGQAPVPATRLPRVSCDGWQ---LQEKQEVFRDGSA--------DQAHEEFLTSLLAKTNAYRPLETSWQVMEDAEFLDMRGAVVNWFAKVSVSYDFANETVVAALSHFDRYVSLTVTPVNDHMLLQLAAYVALLIASKMGETCPLRMRSLANLTGRMFTPLQVKQLEMDMISKLNFRLAPPSPDEALHCLSSLLLRSSSSSDNKSGRGGVPLHSDVLSASSHYLKRARARTCWFRHAPYTLAVAALATAYNSVGLGKERRRLLRECDARSRAVTGRGVDVHGVAACADAMVRDERAAAXXXXXXXXXXNSGHARGSTESPVCGGS---NTAAKDGWGSPTGVAQGA-ELLQKAAFSAVG----VRGD--QGIGSGGGGSGVPLVEDFSPLTTFSP-HGAVKTKAVASHMVAGRRVVRR 421

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig6.12359.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig6.12359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K9F0_9PHAE	5.820e-150	61.57	Cyclin N-terminal domain-containing protein n=2 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 103..192 e-value: 2.1E-16 score: 61.8
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 98..188 e-value: 8.5E-14 score: 51.4
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINE	coord: 94..189
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 74..189

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig6	contig	P-fluviatile_contig6:370707..373709 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig6.12359.1	mRNA_P-fluviatile_contig6.12359.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig6 370462..373709 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig6.12359.1 ID=prot_P-fluviatile_contig6.12359.1|Name=mRNA_P-fluviatile_contig6.12359.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=416bp
MTELGPRRQLPRGEDTDLLCVELCSSDQPPVPPVLLPRVSWDGSDERPQE
EKEKLEQEGTSKVVLMSNPDQGHEDFLTSVLLKTDAYRPLTTSLRCMEDP
DFLDMRGAVVNWFAKVSISYNFDNETVVAALSHFDRYVSLTVTPVNEHVL
LQLAAYVALLIASKMSETCPLRMKSLANLTGRMFTPLQVRLAPPPSSAVI
LSTSSYYLKKARARTCWFRHSPYTLAVAALATAYNSLGLGSLRRRLLKDC
DARVRGVTGQGIEIHAVAACADAMDADERAAAAAAATASLKRGAARCSTE
SPVCGGGCGGSETVKEGWGSPTGVAQGAAELLQKVAYAAVGSTDFVRGSH
VEGVRSGGGGGGVPLVEEFDPPRTFSPCGGAVPTKAVASYVVTAPRLIRR
CRPHRATSRHRWWPA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006671	Cyclin_N
IPR039361	Cyclin
IPR036915	Cyclin-like_sf