prot_P-fluviatile_contig6.12356.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig6.12356.1
Unique Name	prot_P-fluviatile_contig6.12356.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	369

Homology

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BLAST of mRNA_P-fluviatile_contig6.12356.1 vs. uniprot
Match: W4H200_9STRA (RING-type domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H200_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.540e-5
Identity = 85/358 (23.74%), Postives = 132/358 (36.87%), Query Frame = 0

Query:    1 VLQPSVRCGTASAVAPGRGFGGVLLVFGGLTLWEAYDGDDDGGGDIIWSGRTPFLVSNELWDFDLGGDLGWQRLPTWPTGA--GPTARHGATGFFHEGYFLVLGGEDTNQAF-------GELWSYDVVAGTWETLSAASEPLL--ARWGHASAQVVPGDVFAAHDPLRNWTDTLFFFGGSALP---WK--GDAGSQDQKTAAESTVGAVEIAALSGDGSIADQRMHPALQRFGHSMVADSRGWLWVFGGMLNDADTLSARTLVMRLGPGSVSADDSAPPSRHRHGRALTLDTVSTSGRWWEYVPRGSGGHGGVNNNGHFGPMARMFHGAIVWKGRMIVHGGRRRVSEGDVLSSLWSLA 342
            V  P  R    SA      +G  + +FGG T    YD        ++ +        N++W  D    + W  +     G    P +R  A+        +V GG  T   F        ++W++D  + TW++++ A++ +L  AR+ H ++ +           L N    +  F G  +    W    DA      T+ E+     ++      G I               MVA     +W+FGG   D+   +           +++AD S  P        ++L TVST            G    VNN    GP AR  H   VWKG ++V+GGR     GDV     SLA
Sbjct:   91 VANPGPRFDHVSAT-----YGSDIYIFGGTT----YDSK------LVSASNDGTAPMNDMWKLD-SMQVEWSVIDGGGQGGVVRPVSRSQASAVSTPKAMIVFGGVFTPNVFYLPPVDFNDVWAFDFQSHTWQSVAIATKSVLPIARFSHVASTI-----------LVNGVVNMIVFSGRHIVNTRWSILSDAWVLPLSTSGEALPIWTQLTVSRPFGRILS------------GMVAIDSSHMWLFGGFAFDSQMQAVAF------SDTLAADVSLVP-------IVSLKTVSTQ------TAHAEGSSVNVNN----GPRARFGHRMSVWKGNVVVYGGRIVQCLGDVWLRNASLA 386

[Close]

BLAST of mRNA_P-fluviatile_contig6.12356.1 vs. uniprot
Match: A0A6A5A1Y6_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A1Y6_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.410e-5
Identity = 85/358 (23.74%), Postives = 133/358 (37.15%), Query Frame = 0

Query:    1 VLQPSVRCGTASAVAPGRGFGGVLLVFGGLTLWEAYDGDDDGGGDIIWSGRTPFLVSNELWDFDLGGDLGWQRLPTWPTGA--GPTARHGATGFFHEGYFLVLGGEDTNQAF-------GELWSYDVVAGTWETLSAASEPLL--ARWGHASAQVVPGDVFAAHDPLRNWTDTLFFFGGSALP---WK--GDAGSQDQKTAAESTVGAVEIAALSGDGSIADQRMHPALQRFGHSMVADSRGWLWVFGGMLNDADTLSARTLVMRLGPGSVSADDSAPPSRHRHGRALTLDTVSTSGRWWEYVPRGSGGHGGVNNNGHFGPMARMFHGAIVWKGRMIVHGGRRRVSEGDVLSSLWSLA 342
            V+ P  R    SA      +G  + +FGG T    YD        ++ +        N++W  D    + W  +     G    P +R  A+        +V GG  T   F        ++W++D  + TW++++ A++ +L  AR+ H ++ +           L N    +  F G  +    W    DA      T+ E+     ++      G I               MVA     +W+FGG   D+   +           +++AD S  P        ++L TVST            G    VNN    GP AR  H   VWKG ++V+GGR     GDV     SLA
Sbjct:  622 VVNPGPRFDHVSAT-----YGSDIYIFGGTT----YDSK------LVSASNDGTAPMNDMWKLD-SVQVEWSVIDGGGQGGVVRPVSRSQASAVSTLKAMIVFGGVFTPNVFYLPPVDFNDVWAFDFQSHTWQSVAIATKSVLPIARFSHVASTI-----------LVNGVVNMIVFSGRHIVNTRWSILSDAWVLPLSTSGEALPIWTQLTVSRPFGRIMS------------GMVAIDSSHMWLFGGFAFDSQMQAVAF------SDTLAADVSLAP-------IVSLTTVSTQ------TVHAEGSSVNVNN----GPRARFGHRISVWKGNVVVYGGRIVQCLGDVWLRNASLA 917

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig6.12356.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig6.12356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
W4H200_9STRA	7.540e-5	23.74	RING-type domain-containing protein n=4 Tax=Aphano...	[more]
A0A6A5A1Y6_9STRA	9.410e-5	23.74	RING-type domain-containing protein n=1 Tax=Aphano...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 3..154 e-value: 6.1E-10 score: 40.6
None	No IPR available	PFAM	PF13415	Kelch_3	coord: 96..143 e-value: 2.0E-7 score: 31.1
None	No IPR available	PANTHER	PTHR46093	FAMILY NOT NAMED	coord: 21..189
None	No IPR available	PANTHER	PTHR46093:SF5		coord: 78..271
None	No IPR available	PANTHER	PTHR46093:SF5		coord: 21..189
None	No IPR available	PANTHER	PTHR46093	FAMILY NOT NAMED	coord: 78..271
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 14..340

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig6	contig	P-fluviatile_contig6:345787..354045 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig6.12356.1	mRNA_P-fluviatile_contig6.12356.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig6 345785..354045 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig6.12356.1 ID=prot_P-fluviatile_contig6.12356.1|Name=mRNA_P-fluviatile_contig6.12356.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=369bp
VLQPSVRCGTASAVAPGRGFGGVLLVFGGLTLWEAYDGDDDGGGDIIWSG
RTPFLVSNELWDFDLGGDLGWQRLPTWPTGAGPTARHGATGFFHEGYFLV
LGGEDTNQAFGELWSYDVVAGTWETLSAASEPLLARWGHASAQVVPGDVF
AAHDPLRNWTDTLFFFGGSALPWKGDAGSQDQKTAAESTVGAVEIAALSG
DGSIADQRMHPALQRFGHSMVADSRGWLWVFGGMLNDADTLSARTLVMRL
GPGSVSADDSAPPSRHRHGRALTLDTVSTSGRWWEYVPRGSGGHGGVNNN
GHFGPMARMFHGAIVWKGRMIVHGGRRRVSEGDVLSSLWSLAIDVEEEEV
DRGGGGGNGGGNNGGNASD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller
IPR011043	Gal_Oxase/kelch_b-propeller