prot_P-fluviatile_contig6.12329.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig6.12329.1
Unique Name	prot_P-fluviatile_contig6.12329.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	297

Homology

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: D8LFE5_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE5_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 1.130e-110
Identity = 185/301 (61.46%), Postives = 215/301 (71.43%), Query Frame = 0

Query:    1 MSARRKLEECIRELEDSLGAPLAPKVGADGTARASRPA--LELVDSAIATLEASLSLRPGEAVGVTGGAKGGSSKETKWQSQGSSKPRNKGKGNRSADGSGSGKEG---GGAEKAARVSSISPSATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            MSAR KL+ CI+ LEDSLG P A K    G    + PA  L+LVDS IATLEASL L PG AV     AKG +  +TK  ++G                    KEG   GG +KA + ++ +   +   QP+GTKVD RVG I  VW HE+ADKLYCEEIDVGE APRNIASGL  HYSLEEMKGR+V+VMCNLKPRNLKGFKS GMVVCAV  L  G E VEL+ PPEG+AVGE L+FEG++GGPF P+SAAQMEKKKVL+K+LP+LTTD EGTVRWR+HALVS+CG C AP VR+GAVR
Sbjct:    1 MSARSKLDACIKGLEDSLGVPAALKDSIGGVPSTTAPATALQLVDSTIATLEASLGLPPG-AVLTPVDAKGIAGGDTKRPTKG--------------------KEGVNKGGRKKAGKAAASNVGVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVVPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKILPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 280

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A7S2Y0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.010e-74
Identity = 109/178 (61.24%), Postives = 137/178 (76.97%), Query Frame = 0

Query:  119 SATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            +A    QP+ TK+D RVG I  VW+HE+ADKLYCEEIDVGED PR IASGL  HYSLEEM+GRRV+V+CNLKPRNL GFKSHGMV+CAVE    G+E+VE + PPEGAAVGE + +EG+ GGPF P++AAQ+EKKKV   +LP+L+TD      W+ H ++++ GPC A  + NG +R
Sbjct:   74 NAPAGDQPDITKIDLRVGKITKVWRHETADKLYCEEIDVGEDEPRAIASGLVPHYSLEEMQGRRVLVLCNLKPRNLVGFKSHGMVLCAVENKPDGSEKVEFVEPPEGAAVGERVQYEGLGGGPFEPITAAQVEKKKVFPAVLPNLSTDANHVGMWKGHKMMTSAGPCVAATISNGKLR 251

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: D0MS46_PHYIT (tRNA-binding domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MS46_PHYIT)

HSP 1 Score: 229 bits (583), Expect = 1.980e-71
Identity = 109/172 (63.37%), Postives = 131/172 (76.16%), Query Frame = 0

Query:  125 QPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            QPE TK+D RVG I  VWKHE+ADKLYCEEIDVGED PR+IASGL  HYSLEEM+ RRV+V+CNLKPRNL GF+SHGMV+CA   LE G E+V  + PPEGA +GE +TFEG++G PF+P   AQ+EKKKVL  L  D+ TD  G  +W+EH   ++ GPC APV  NG +R
Sbjct:   60 QPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRHIASGLVYHYSLEEMQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKIGERITFEGLTGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAPV-NNGVIR 227

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: G4YER7_PHYSP (tRNA-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YER7_PHYSP)

HSP 1 Score: 224 bits (572), Expect = 8.810e-70
Identity = 108/172 (62.79%), Postives = 130/172 (75.58%), Query Frame = 0

Query:  125 QPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            QPE TK+D RVG I  VWKHE+ADKLYCEEIDVGEDAPR IASGL  HYSLE+M+  RV+V+CNLKPRNL GF+SHGMV+CA   LE G E+V  + PPEGA VGE +TFEG++G PF+P   AQ+EKKKVL  L  ++ TD  G  +W+EH   ++ GPC APV  NG +R
Sbjct:   59 QPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDAPRQIASGLVHHYSLEQMQDARVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKVGERITFEGLTGEPFSP---AQVEKKKVLTVLGDEMKTDDSGVAKWKEHVFGTSAGPCTAPV-NNGLIR 226

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A024UG59_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG59_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.040e-69
Identity = 104/177 (58.76%), Postives = 133/177 (75.14%), Query Frame = 0

Query:  120 ATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            A  E+Q E TK+D RVG I NVWKHE+ADKLYCEEIDVGED PR IASGL  HY+LE+M+GRR++VMCNLKPRNL GFKSHGMV+CAV T E G+E V  + PP GA +GE + +EG++G P+ P   AQ+EKKKVL      L +D  G  +W++H ++++ GPC +P +RNG +R
Sbjct:   58 APAEEQAEITKLDIRVGKIVNVWKHETADKLYCEEIDVGEDEPRQIASGLVKHYTLEQMQGRRLLVMCNLKPRNLVGFKSHGMVLCAVSTNEDGSENVAFVEPPAGAGIGERVMYEGLTGEPWTP---AQVEKKKVLVTAGEGLVSDENGVAKWKDHVMLTSAGPCTSPSIRNGILR 231

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A1V9YMZ7_9STRA (tRNA-binding domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMZ7_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.030e-68
Identity = 106/178 (59.55%), Postives = 132/178 (74.16%), Query Frame = 0

Query:  119 SATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            +A  E QPE TK+D RVG I  VWKHE+ADKLYCEEIDVGED PR IASGL  HYSLEEM+GR ++VMCNLK R L GFKSHGMV+CAV+TLE G+ERV  + PP  A +GE + +EG+SG P+ P   AQ+EKKKV+      LT+D  G  +W++HA +++ GPC +P V NG +R
Sbjct:   63 AAPAEDQPEITKLDIRVGKITKVWKHETADKLYCEEIDVGEDEPRLIASGLVKHYSLEEMQGRMLLVMCNLKARALVGFKSHGMVLCAVKTLEDGSERVAFVEPPANAKIGERIFYEGLSGEPWTP---AQVEKKKVVVAAAEHLTSDATGVAKWKDHAFLTSAGPCVSPSVCNGILR 237

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A225VLY1_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLY1_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.430e-68
Identity = 106/172 (61.63%), Postives = 129/172 (75.00%), Query Frame = 0

Query:  125 QPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            QPE TK+D RVG I  VWKHE+ADKLYCEEIDVGED PR IASGL  HY+LEEM+ R V+V+CNLKPRNL GF+SHGMV+CA   LE G E+V  + PP+GA VGE +TFEG++G P +P   AQ+EKKKVL  L  D+ TD +G  +W+EH   ++ GPC APV  NG +R
Sbjct:   54 QPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRQIASGLVHHYTLEEMQDRSVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPQGAKVGERVTFEGLTGEPLSP---AQVEKKKVLTVLGDDMKTDDKGVAKWKEHVFNTSAGPCTAPVT-NGLIR 221

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A397EZY8_9STRA (tRNA-binding domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZY8_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.700e-68
Identity = 105/178 (58.99%), Postives = 133/178 (74.72%), Query Frame = 0

Query:  119 SATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            +A  E+Q E TK+D RVG I NVWKHE+ADKLYCEEIDVGEDAPR IASGL  HY+LE+M+GR V+VMCNLK RNL GFKSHGMV+CAV T   G+E V  + PP GA VGE +T++GV+GG   P + AQ+EKKKVL      L +D EG  +W +H ++++ GPC +P +R+G +R
Sbjct:   81 AAPAEEQAEITKLDIRVGKIVNVWKHETADKLYCEEIDVGEDAPRQIASGLVKHYTLEQMQGRLVLVMCNLKARNLVGFKSHGMVLCAVATNADGSESVAFVEPPAGAVVGERVTYDGVTGG--EPWTPAQVEKKKVLVSAGEGLVSDAEGVAKWNDHVMLTSAGPCTSPSIRSGILR 256

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: A0A397BX65_9STRA (tRNA-binding domain-containing protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BX65_9STRA)

HSP 1 Score: 220 bits (560), Expect = 4.720e-68
Identity = 103/178 (57.87%), Postives = 133/178 (74.72%), Query Frame = 0

Query:  119 SATLEQQPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            +A  E+Q E TK+D RVG I NVWKHE+ADKLYCEEIDVGEDAPR IASGL  HY+LE+M+GR V+VMCNLK RNL GFKSHGMV+CAV T   G+E +  + PP GA VGE +T++G++GG   P + AQ+EKKKVL      L +D EG  +W +H ++++ GPC +P +R+G +R
Sbjct:   45 AAPAEEQAEITKLDIRVGKIVNVWKHETADKLYCEEIDVGEDAPRQIASGLVKHYTLEQMQGRLVLVMCNLKARNLVGFKSHGMVLCAVATNADGSESIAFVEPPAGAVVGERVTYDGLTGG--EPWTPAQVEKKKVLVSAGEGLVSDAEGVAKWNDHVMLTSAGPCTSPSIRSGILR 220

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BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Match: K3W9Y0_GLOUD (tRNA-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y0_GLOUD)

HSP 1 Score: 219 bits (559), Expect = 1.050e-67
Identity = 102/172 (59.30%), Postives = 127/172 (73.84%), Query Frame = 0

Query:  125 QPEGTKVDFRVGLIKNVWKHESADKLYCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSHGMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQMEKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR 296
            QPE TK+D RVG I  VWKHE+ADKLYCEEIDVGED PR IASGL  HYSLEEM+ RR++V+CNLKPRNL GFKSHGMV+CA   +EGG E+V  + PP  A +GE + F+G++G P+ P   AQ+EKKKVL  +  D+ TD  G  +W++H   ++ GPC APV  NG +R
Sbjct:   67 QPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRQIASGLVYHYSLEEMQDRRILVLCNLKPRNLVGFKSHGMVMCAAVPIEGGKEKVAFVDPPADAKIGERIVFDGLTGEPYTP---AQVEKKKVLVNIGEDMKTDASGVAKWKDHVFNTSAGPCTAPVA-NGVIR 234

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig6.12329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFE5_ECTSI	1.130e-110	61.46	tRNA-binding domain-containing protein n=2 Tax=Ect...	[more]
A0A7S2Y0W4_9STRA	1.010e-74	61.24	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
D0MS46_PHYIT	1.980e-71	63.37	tRNA-binding domain-containing protein n=11 Tax=Ph...	[more]
G4YER7_PHYSP	8.810e-70	62.79	tRNA-binding domain-containing protein n=3 Tax=Phy...	[more]
A0A024UG59_9STRA	1.040e-69	58.76	Methionine-tRNA ligase, beta subunit n=1 Tax=Aphan...	[more]
A0A1V9YMZ7_9STRA	2.030e-68	59.55	tRNA-binding domain-containing protein n=1 Tax=Ach...	[more]
A0A225VLY1_9STRA	2.430e-68	61.63	Methionine-tRNA ligase, beta subunit n=1 Tax=Phyto...	[more]
A0A397EZY8_9STRA	3.700e-68	58.99	tRNA-binding domain-containing protein n=3 Tax=Aph...	[more]
A0A397BX65_9STRA	4.720e-68	57.87	tRNA-binding domain-containing protein (Fragment) ...	[more]
K3W9Y0_GLOUD	1.050e-67	59.30	tRNA-binding domain-containing protein n=1 Tax=Glo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 133..230 e-value: 2.8E-25 score: 88.2
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 127..233 score: 30.216
None	No IPR available	GENE3D	2.40.50.140		coord: 124..296 e-value: 1.5E-50 score: 173.3
None	No IPR available	PANTHER	PTHR11586:SF39	NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN	coord: 102..295
None	No IPR available	PANTHER	PTHR11586	FAMILY NOT NAMED	coord: 102..295
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 129..280

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig6	contig	P-fluviatile_contig6:95026..105355 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig6.12329.1	mRNA_P-fluviatile_contig6.12329.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig6 94065..105403 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig6.12329.1 ID=prot_P-fluviatile_contig6.12329.1|Name=mRNA_P-fluviatile_contig6.12329.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=297bp
MSARRKLEECIRELEDSLGAPLAPKVGADGTARASRPALELVDSAIATLE
ASLSLRPGEAVGVTGGAKGGSSKETKWQSQGSSKPRNKGKGNRSADGSGS
GKEGGGAEKAARVSSISPSATLEQQPEGTKVDFRVGLIKNVWKHESADKL
YCEEIDVGEDAPRNIASGLALHYSLEEMKGRRVVVMCNLKPRNLKGFKSH
GMVVCAVETLEGGNERVELLAPPEGAAVGENLTFEGVSGGPFAPLSAAQM
EKKKVLEKLLPDLTTDGEGTVRWREHALVSACGPCKAPVVRNGAVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002547	tRNA-bd_dom
IPR012340	NA-bd_OB-fold