prot_P-fluviatile_contig59.12310.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig59.12310.1
Unique Nameprot_P-fluviatile_contig59.12310.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length182
Homology
BLAST of mRNA_P-fluviatile_contig59.12310.1 vs. uniprot
Match: D7FPB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB4_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.560e-39
Identity = 79/176 (44.89%), Postives = 112/176 (63.64%), Query Frame = 0
Query:    7 LLFGVAMMAEYWVECLPSQLCSPESLAGRLQTASENSNLFAWAGLANAAPVAAFGALMTSFQDWPQMVVDLALVAGTIAAVGVILYVAVRTSTVIDQAMSQGSATSVAFYSKARKSVWQQALTLITVGVVMIAVTTAKQLTRAGRSTPIIVWTLQILCGHAVTVVFAAATRVQEPP 182
            +LFGVAMMAE+W+E LP QL SP S A  L   S   N+F   GL NA  ++  G        WP ++VDLA+ +G+     VI++VAVR ++ I+ AMS+ +A+S  FY +A+K++W+QAL L ++G  +      + LT+ GRSTPIIVWT Q LCGHA  ++F + T+ Q  P
Sbjct:    1 MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGLLNAGIISTLGVGTLFMTFWPPLLVDLAVASGSAITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTQFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAP 176          
BLAST of mRNA_P-fluviatile_contig59.12310.1 vs. uniprot
Match: D7FVJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ6_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.320e-37
Identity = 85/179 (47.49%), Postives = 115/179 (64.25%), Query Frame = 0
Query:    3 LTPSLLFGVAMMAEYWVECLPSQLCSPESLAGRLQTASENSNLFAWAGLANAAPVAAFGALMTSFQDWPQMVVDLALVAGTIAAVGVILYVAVRTSTVIDQAMSQ-----GSATSVAFYSKARKSVWQQALTLITVGVVMIAVTTAKQLTRAGRSTPIIVWTLQILCGHAVTVVFAAAT 176
            L P  +F VAM+AEYWVE LPSQ+ +P+S AG+L+ ASE S+LF   G+AN   V+  G +    + WPQ   DL +V G + A  V+ +VA R + VI+QA S      GS +S AFY KA++++W QA  L  VG   + V   K+LT AGRSTPII+ TLQIL GH   ++F++AT
Sbjct:   43 LRPCAMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADLFIVGGVLTAELVVFFVASRITAVINQATSTAMGRPGSPSSRAFYFKAKRNMWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIIETLQILTGHGGAIMFSSAT 221          
BLAST of mRNA_P-fluviatile_contig59.12310.1 vs. uniprot
Match: A0A6H5KVX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.080e-26
Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    3 LTPSLLFGVAMMAEYWVECLPSQLCSPESLAGRLQTASENSNLFAWAGLANAAPVAAFGALMTSFQDWPQMVVDLALVAGTIAAVGVILYVAVRTSTVIDQAMSQGSATSVAFYSKARKSVWQQALTLITVGVVMIAVTTAKQLTRAGRSTPIIVWTLQI 162
            L P  +F VAM+AEYWVE LPSQ+ +P+S AG+L+ ASE S+LF   G+AN   V+  G +    + WPQ   D+ +V G + A                     GS +S  FYSKA++++W QA  L  VG   + V   K LT AGRSTPII+ TLQ+
Sbjct:   27 LRPCAMFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARTWPQQAADIFVVGGILTA---------------------GSPSSRTFYSKAKRNLWIQAAALSGVGCFPMLVIAIKLLTMAGRSTPIILETLQV 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig59.12310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPB4_ECTSI1.560e-3944.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVJ6_ECTSI1.320e-3747.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX1_9PHAE1.080e-2642.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..73
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.538
NoneNo IPR availableTMHMMTMhelixcoord: 122..141
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig59contigP-fluviatile_contig59:864988..867846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig59.12310.1mRNA_P-fluviatile_contig59.12310.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig59 864988..867846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig59.12310.1 ID=prot_P-fluviatile_contig59.12310.1|Name=mRNA_P-fluviatile_contig59.12310.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=182bp
MFLTPSLLFGVAMMAEYWVECLPSQLCSPESLAGRLQTASENSNLFAWAG
LANAAPVAAFGALMTSFQDWPQMVVDLALVAGTIAAVGVILYVAVRTSTV
IDQAMSQGSATSVAFYSKARKSVWQQALTLITVGVVMIAVTTAKQLTRAG
RSTPIIVWTLQILCGHAVTVVFAAATRVQEPP
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