prot_P-fluviatile_contig59.12267.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig59.12267.1
Unique Name	prot_P-fluviatile_contig59.12267.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	914

Homology

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BLAST of mRNA_P-fluviatile_contig59.12267.1 vs. uniprot
Match: A0A6H5KH38_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH38_9PHAE)

HSP 1 Score: 616 bits (1588), Expect = 3.270e-202
Identity = 506/1075 (47.07%), Postives = 577/1075 (53.67%), Query Frame = 0

Query:  118 LGASAMYAPCPNVPSRRATEAEHRQRVFEKQRELEGKQKKQQRGEAKRRRHQELAIWKEQRDEAKQRKAGGGGSTGGRAGXXXXXXQTSPSAGKQXXXXXXSKE---GAPAASAEAHAVLVMRLPDGTSATHTFRGADTLREVVSWLQSTEPTAGMLQGKELELRCPFPPPGRAVAGEDLDASSVEGVGLCPRGRLMVQFSGGC-----------------------------------------------------------------------------------------------------------------------------------GGDGCXXXXXXXXXXXXXXXXXXXXXG------------------------------------------------------------------------------------------------------------------HRVSVGKPKAEIGSL-----------------------------QEILVENICQRMKSGGAHQAITYGGLDGSTGGRILQRLVELRALTPRMLAAFRGCPVAELSLDRNPKATNALLGELGRKVSLTSLSLAHDDMVTVEGIESLVGLRALLTLDISGCKANNGWLKAIAKLPALRTLVLRGCNKVADLGVLSLSRGAXXXXXXXXXXXXXXXXXXXXHLSALVVAPASAASGTGGQGGRLECLRLDGLMELSDDGLDALLVHDGSGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAPLTEXXXXXXXXXXXPANAPLSSSSTSRLRVLSLSGCRGVTDEGLARIGACLALRSSLREIDVSGTSATEAGLVRLLLRTPSSSSSSLAG--GGIALGRRVAPLRLESLVLPAYGRGITGAGLAALLLSGGGLKTLTGLDLHGCNGPGVTSQALSGIGRLSLLRSLSLANVRAFDDDALTAVCSSCHALITLDLSGTGVSAALGLALLGSALTDLSLAYTNVNDDTLDAVASLPSLATLTLRGTXXTGAGVARLSXXXXXXXXXXXXTRAASEGGERGAASFAVESLRAKTAALNIRL 913
            LGA+A +AP P+VPS  ATEAEHRQRVFEKQRELE KQKKQ+RGE+      ELAIWKEQ         G  G             QTSP  GK         +   G      +A A++VMRLPDGTS TH+F  A TLREV++WLQSTEPTAG L+ KEL+LRCPFPPPGRA+AG++LD+S+VE VGL PRGRLMVQFS G                                                                                                                                    GG+G           XXXXXXXXXXX                                                                                                                   HR          G++                             Q+ILV+NICQR++  G HQA++YGGLDG+TG RILQRL  LRALTP ML+AFRGCPVAELSLDRNP+ TNALL ELGRKVS+ SLSLAH+D +T+EGIESL GLRAL +LDISGCK  NGWLK IAKLPAL TLVLRGC KVADLG+L L+RGAXXXXXXXXXXXXXXXXXXX HLS++VV            GG+LECLRLDGL+ LSDDGLDALL+ DG G               XXXXXXXXXXXXXXXX       XXXXXXXXX     AP SSS    LRVLSLS C GV D+GLAR+GA   LR+SLRE+DVSGTS TE+GL+RLL  + ++++S  AG  G +   RR APLRLESLVL   G GITG GL+AL+    GL +LT LDL GC GPGVTSQAL+G+ RL  L+ LS+A V AFDDDALTAVCSSC+AL  L+L  T V+ A GL LLGSA+ DLSLA+TN++DDT+DAVASLP L TLTLRGT  TGAGVARLS            TRAA EGG  G AS AVE LRA+TAALNIRL
Sbjct:   43 LGATAEHAPGPSVPSLHATEAEHRQRVFEKQRELEAKQKKQERGESXXXXXXELAIWKEQXXXXXXXXGGXXGK--------GPAVQTSPGEGKARGGDADRADQGRGGACLGGQAEAMVVMRLPDGTSTTHSFGTAATLREVLTWLQSTEPTAGKLRSKELQLRCPFPPPGRAIAGDELDSSTVESVGLFPRGRLMVQFSDGATIKKGEGAMPSADNDQAGATRXXXXXXXXRFGGWGFPQGPGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAWGGEGAHPFGEAGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRXXXXXXXXXXGTVAGAXXXXXXXXLPRGSRGWRWAHCRCQREQDILVDNICQRIRGSGQHQAVSYGGLDGATGTRILQRLANLRALTPAMLSAFRGCPVAELSLDRNPRVTNALLAELGRKVSIMSLSLAHNDAMTLEGIESLAGLRALASLDISGCKVTNGWLKVIAKLPALETLVLRGCTKVADLGILGLARGAXXXXXXXXXXXXXXXXXXXAHLSSMVV------------GGKLECLRLDGLVGLSDDGLDALLLGDGDG--------LEAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEEAPASSS----LRVLSLSRCPGVADQGLARLGASRPLRASLRELDVSGTSTTESGLLRLLDPSSTAAASGEAGVCGAVVGRRRPAPLRLESLVLQHGGGGITGVGLSALV----GLTSLTRLDLEGCRGPGVTSQALAGLARLVRLQWLSVAAVPAFDDDALTAVCSSCNALRVLNLGSTSVARAAGLGLLGSAVIDLSLAHTNIDDDTMDAVASLPRLTTLTLRGTAVTGAGVARLSGLRGLRSLVLTGTRAAQEGGAGGGASSAVEGLRARTAALNIRL 1081

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BLAST of mRNA_P-fluviatile_contig59.12267.1 vs. uniprot
Match: D8LSQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ0_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 6.890e-159
Identity = 321/556 (57.73%), Postives = 365/556 (65.65%), Query Frame = 0

Query:  365 VENICQRMKSGGAHQAITYGGLDGSTGGRILQRLVELRALTPRMLAAFRGCPVAELSLDRNPKATNALLGELGRKVSLTSLSLAHDDMVTVEGIESLVGLRALLTLDISGCKANNGWLKAIAKLPALRTLVLRGCNKVADLGVLSLSRGAXXXXXXXXXXXXXXXXXXXXHLSALVVAPASAASGTGGQGGRLECLRLDGLMELSDDGLDALLVHDGSGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAPLTEXXXXXXXXXXXPANAPLSSSSTSRLRVLSLSGCRGVTDEGLARIGACLALRSSLREIDVSGTSATEAGLVRLLLRTPSSSSSSLAGGGIALGRRVAP-------LRLESLVLPAYGRGITGAGLAALLLSGGGLKTLTGLDLHGCNGPGVTSQALSGIGRLSLLRSLSLANVRAFDDDALTAVCSSCHALITLDLSGTGVSAALGLALLGSALTDLSLAYTNVNDDTLDAVASLPSLATLTLRGTXXTGAGVARLSXXXXXXXXXXXXTRAASEGGERGAASFAVESLRAKTAALNIRL 913
            ++NICQR++ GG HQA++YGGLD +TG RILQRL +LRALTP ML+AFRGCPVAELSLDRNP+ TNALL ELGRKVS+ SLSLAH+D +T+EGIESL GLRAL +LDISGCK  NGWLK IAKLPAL TL+LRGC KVADLG+L LSRGAXXXXXXXXXXXXXXXXXXX HLS++VV            GG+LECLRLDGL+ LSDDGLDALL+ DG G G                                                                           GLAR+GA   LR+SLRE+DVSGTSATE+GLVRLL   PS+                         LRLESLVL   G GIT  GL+AL+    GL +LT +DL GC GPGVTSQAL+G+ RL  L+ LS+A V AFDDDALTAVCSSC+AL  L+L  T V+ A GLALLGSA+ DLSLA+TN++DDT+DAVASLP L TLTLRGT  TGAGVARLS            TRAA EGG  G AS AVE LRA+TAALNIRL
Sbjct:    1 MDNICQRIRGGGQHQAVSYGGLDAATGTRILQRLADLRALTPAMLSAFRGCPVAELSLDRNPRVTNALLAELGRKVSIMSLSLAHNDAMTLEGIESLAGLRALASLDISGCKVTNGWLKVIAKLPALETLLLRGCTKVADLGILGLSRGAXXXXXXXXXXXXXXXXXXXAHLSSMVV------------GGKLECLRLDGLVGLSDDGLDALLLGDGDGLG---------------------------------------------------------------------------GLARLGASRPLRASLRELDVSGTSATESGLVRLL--DPSAXXXXXXXXXXXXXXXXXXXXXXXXXLRLESLVLQHGGGGITSVGLSALV----GLTSLTRMDLEGCRGPGVTSQALAGLARLVRLQWLSVAAVPAFDDDALTAVCSSCNALRVLNLGSTSVARAAGLALLGSAMIDLSLAHTNIDDDTMDAVASLPRLTTLTLRGTAVTGAGVARLSGLRGLRSLVLTGTRAAQEGGAGGGASSAVERLRARTAALNIRL 463

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BLAST of mRNA_P-fluviatile_contig59.12267.1 vs. uniprot
Match: A7RHX6_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RHX6_NEMVE)

HSP 1 Score: 63.9 bits (154), Expect = 1.290e-6
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 0

Query:  356 EIGSLQEILVENICQRMKSGGAH--QAITYGGLDGSTGGRILQRLVELRALTPRMLAAFRGCPVAELSLDRNPKATNALLGELGRKVSLTSLSLAHDDMVTVEGIESLVGLRALLTLDISGCK-ANNGWLKAIAKLPALRTLVLRGCNK--VADLGVLSLS 511
            ++  L+++ + N+  R+ +G  H    +T G L  +   +I+ RLVE +ALTP++L AF  C +  + LD     TN LL EL     L  LS+    ++T + +E++V L AL TL +   K ++ G +        ++TLV    N   V + G  SL+
Sbjct:  399 DVPRLEDLCITNVSLRL-AGQRHLQPLVTLGVLPHNVCDKIISRLVEDKALTPKVLHAFISCCLRYIKLDCYLLVTNDLLAELRFHRQLVHLSIKSCPIITDKALEAVVDLPALTTLQLDNTKISDKGLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLA 558

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig59.12267.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig59.12267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KH38_9PHAE	3.270e-202	47.07	UBX domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LSQ0_ECTSI	6.890e-159	57.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A7RHX6_NEMVE	1.290e-6	31.06	Predicted protein n=2 Tax=Nematostella vectensis T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 439..464 e-value: 190.0 score: 4.6 coord: 488..513 e-value: 1.0 score: 18.4 coord: 848..872 e-value: 180.0 score: 4.7 coord: 643..668 e-value: 0.03 score: 23.5 coord: 775..800 e-value: 59.0 score: 8.5 coord: 514..539 e-value: 9.6E-4 score: 28.4
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 7..44 e-value: 0.0015 score: 27.8
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 5..45 score: 8.812
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 636..698 e-value: 1.1E-8 score: 36.7 coord: 480..543 e-value: 1.3E-12 score: 49.4 coord: 398..479 e-value: 6.0E-7 score: 31.0
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 699..891 e-value: 4.5E-24 score: 87.0
None	No IPR available	GENE3D	3.10.20.90		coord: 224..314 e-value: 6.4E-9 score: 37.8
None	No IPR available	PANTHER	PTHR13382:SF6	SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1	coord: 561..811 coord: 440..695
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 561..811 coord: 440..695
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 420..690
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 640..884
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 228..283 e-value: 1.8E-4 score: 21.6
IPR001012	UBX domain	PROSITE	PS50033	UBX	coord: 227..312 score: 11.653
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 517..537 e-value: 0.12 score: 12.5 coord: 644..663 e-value: 0.28 score: 11.3
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 225..313
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 7..44

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig59	contig	P-fluviatile_contig59:208225..226525 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig59.12267.1	mRNA_P-fluviatile_contig59.12267.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig59 208211..227337 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig59.12267.1 ID=prot_P-fluviatile_contig59.12267.1|Name=mRNA_P-fluviatile_contig59.12267.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=914bp
MGSIGENEATVELLVNAGFERHAAEVAALSANGDAERAFGLILSWDGAAP
PPLPVLPAAAAGGRGGHGGGGGALTLGRAPGSSLPSASSSLAGSADNGAG
AGAGADVSAAAAAAASPLGASAMYAPCPNVPSRRATEAEHRQRVFEKQRE
LEGKQKKQQRGEAKRRRHQELAIWKEQRDEAKQRKAGGGGSTGGRAGAGA
GAGQTSPSAGKQEAGAGHSKEGAPAASAEAHAVLVMRLPDGTSATHTFRG
ADTLREVVSWLQSTEPTAGMLQGKELELRCPFPPPGRAVAGEDLDASSVE
GVGLCPRGRLMVQFSGGCGGDGCGDGGGGGSGGGGGGGGGGGGDGHRVSV
GKPKAEIGSLQEILVENICQRMKSGGAHQAITYGGLDGSTGGRILQRLVE
LRALTPRMLAAFRGCPVAELSLDRNPKATNALLGELGRKVSLTSLSLAHD
DMVTVEGIESLVGLRALLTLDISGCKANNGWLKAIAKLPALRTLVLRGCN
KVADLGVLSLSRGAPALTSLDLTGCTGVTDAGVAHLSALVVAPASAASGT
GGQGGRLECLRLDGLMELSDDGLDALLVHDGSGDGGAAAAAAAAAAVNRA
AAAASRVSSSGATGTTAPLTEAAAAAAAAAAAPANAPLSSSSTSRLRVLS
LSGCRGVTDEGLARIGACLALRSSLREIDVSGTSATEAGLVRLLLRTPSS
SSSSLAGGGIALGRRVAPLRLESLVLPAYGRGITGAGLAALLLSGGGLKT
LTGLDLHGCNGPGVTSQALSGIGRLSLLRSLSLANVRAFDDDALTAVCSS
CHALITLDLSGTGVSAALGLALLGSALTDLSLAYTNVNDDTLDAVASLPS
LATLTLRGTGVTGAGVARLSSLANLRSLVLTGTRAASEGGERGAASFAVE
SLRAKTAALNIRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006553	Leu-rich_rpt_Cys-con_subtyp
IPR015940	UBA
IPR032675	LRR_dom_sf
IPR001012	UBX_dom
IPR001611	Leu-rich_rpt
IPR029071	Ubiquitin-like_domsf
IPR009060	UBA-like_sf