prot_P-fluviatile_contig58.12247.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig58.12247.1
Unique Nameprot_P-fluviatile_contig58.12247.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length357
Homology
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BLAST of mRNA_P-fluviatile_contig58.12247.1 vs. uniprot
Match: D8LHZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHZ1_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 3.490e-130
Identity = 198/357 (55.46%), Postives = 252/357 (70.59%), Query Frame = 0 
Query:    8 RWHMLSRLAVAAAVLGMCGVGA--IEWSMTTSSTSEFVDTANVGEIVEFSFAPGERYNIEFVGEPSNHFAVSYRQCSLEDPQPLQIQYSDKLQYLPFVGGCLYAENAAAGRAAGSTDGIRTNGCTFWQYNPSSEMYSTSGQDYTGRELLEPGRVRFENQGTGNATVEVAMYSELVPAPASLANLDIWIEDSFIKKDRVVNTSVNVYFNNDDAFCEKYTCTVTGYLNEYVEGQESLSLCQVLADGAVVH-EEPFTTYIPLSFELPARNEYFVTVVLSAKNSTKAAADYAALVETGQDKIVVFQTGSFLPDSSARIFAGVSLVPLIWLILLNTLLSSLGLAGG-----QRDAAIPTLGW 356
            R  +L  LA AA+ L   GVG   IEWS TTSS+SE+V +A VGE++     PG R NI+FVG+ SNHFAVSYRQCSL+DPQPLQIQYS+KL YLP +GGC+YA+N            +  +GCTFWQYNP  E YS SG  Y   E LE GRVRFENQG GNATV+V M+SE VP P+ +    +WIEDSFIK+  ++NT+VNVYFN+D+ +C  + CTV GY+N+Y+EGQ+SLSLCQV   G + H +EPF  YIPLSF+LP  NEY+VTVV++AK S+  A++Y  + E G D++VVFQT +  PD+ AR+ AG+SL+ L WLIL NTL++SLG   G      R+  +P  GW
Sbjct:    6 RRRLLPTLATAAS-LCTAGVGVYGIEWSETTSSSSEYVYSAAVGELLTIVIQPGLRANIDFVGDLSNHFAVSYRQCSLDDPQPLQIQYSEKLNYLPSIGGCIYAQN--------DLSVLGEDGCTFWQYNPE-ETYSKSGIAYEDTEPLEAGRVRFENQGAGNATVDVVMFSEEVPVPSGVVTQSVWIEDSFIKEGSLINTTVNVYFNDDNNYCGGFGCTVDGYVNDYIEGQDSLSLCQVQDGGELYHKDEPFDPYIPLSFDLPEGNEYYVTVVVTAKESSNPASNYTTMAEYGLDQVVVFQTDTTQPDNGARVLAGLSLMSLSWLILFNTLMASLGATSGGTQATMRETVVPATGW 352
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig58.12247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHZ1_ECTSI3.490e-13055.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..337
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..356
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.502
NoneNo IPR availableTMHMMTMhelixcoord: 318..340
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig58contigP-fluviatile_contig58:901584..907204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig58.12247.1mRNA_P-fluviatile_contig58.12247.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig58 900121..907827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig58.12247.1 ID=prot_P-fluviatile_contig58.12247.1|Name=mRNA_P-fluviatile_contig58.12247.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=357bp
MAFFKPMRWHMLSRLAVAAAVLGMCGVGAIEWSMTTSSTSEFVDTANVGE
IVEFSFAPGERYNIEFVGEPSNHFAVSYRQCSLEDPQPLQIQYSDKLQYL
PFVGGCLYAENAAAGRAAGSTDGIRTNGCTFWQYNPSSEMYSTSGQDYTG
RELLEPGRVRFENQGTGNATVEVAMYSELVPAPASLANLDIWIEDSFIKK
DRVVNTSVNVYFNNDDAFCEKYTCTVTGYLNEYVEGQESLSLCQVLADGA
VVHEEPFTTYIPLSFELPARNEYFVTVVLSAKNSTKAAADYAALVETGQD
KIVVFQTGSFLPDSSARIFAGVSLVPLIWLILLNTLLSSLGLAGGQRDAA
IPTLGW*
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