prot_P-fluviatile_contig58.12195.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig58.12195.1
Unique Nameprot_P-fluviatile_contig58.12195.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length267
Homology
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BLAST of mRNA_P-fluviatile_contig58.12195.1 vs. uniprot
Match: D8LHX4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX4_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 1.920e-91
Identity = 142/221 (64.25%), Postives = 172/221 (77.83%), Query Frame = 0 
Query:    1 MAPTG-WMRR--ALVAAAVSLFALASRCSAVRPGGNGVTLTTSGSVVNDDGTTIEEYELRETDPVLGHFVSLGAAAHKLLNKSGYAFGSVVKMAHSDRDKEFGEGPDRAAWFPMVIVLDVFEEGSGDEGQDVTSHYEVTLDYRPKTVVPPGVVIVEARKLDAKGGVVASLDVLPAEELGFLEKNRAGITMMLGVVIASGVVKFLRTNIENLVKKAKQDREE 218
            MAPTG W R    LVA  V+L +L     A R GG GV LT SG V+  DG+T EEYE+RE+DP+  HF+SLG+AA KLLNKSGYAFGS+V+++HSDRDKE+GEGP+R AWFPMV+ LDVF EGSGD G+D+T+ YEV LD+ PKT+  PG+V++ A +++  GGV A LDVLP EE GFLEKNR GITMM GV+IASG+VKFLR  IE LVKKAK DR+E
Sbjct:    1 MAPTGRWNRMWFLLVATVVTLLSL--HADAARLGGEGVALTRSGDVLLADGSTQEEYEVRESDPITAHFISLGSAAQKLLNKSGYAFGSLVRISHSDRDKEYGEGPERTAWFPMVVFLDVFGEGSGDNGEDITARYEVALDFHPKTIAAPGLVVLAAWRINTDGGVAAKLDVLPPEEKGFLEKNRPGITMMFGVIIASGIVKFLRRGIERLVKKAKADRQE 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig58.12195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHX4_ECTSI1.920e-9164.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig58contigP-fluviatile_contig58:255933..261195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig58.12195.1mRNA_P-fluviatile_contig58.12195.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig58 255885..262393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig58.12195.1 ID=prot_P-fluviatile_contig58.12195.1|Name=mRNA_P-fluviatile_contig58.12195.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=267bp
MAPTGWMRRALVAAAVSLFALASRCSAVRPGGNGVTLTTSGSVVNDDGTT
IEEYELRETDPVLGHFVSLGAAAHKLLNKSGYAFGSVVKMAHSDRDKEFG
EGPDRAAWFPMVIVLDVFEEGSGDEGQDVTSHYEVTLDYRPKTVVPPGVV
IVEARKLDAKGGVVASLDVLPAEELGFLEKNRAGITMMLGVVIASGVVKF
LRTNIENLVKKAKQDREESEGGDAATATAAATATAGQAAAPAGANGAGWK
GGDNRTKKKSRGAKQD*
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