prot_P-fluviatile_contig58.12194.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig58.12194.1
Unique Name	prot_P-fluviatile_contig58.12194.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	472

Homology

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BLAST of mRNA_P-fluviatile_contig58.12194.1 vs. uniprot
Match: D8LHX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX3_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 1.600e-200
Identity = 325/476 (68.28%), Postives = 359/476 (75.42%), Query Frame = 0

Query:    1 MGGT-NAAVVAVGRTFFRVTLIGYALSGLAMFPAVILGLRNGFFQWEMDRCSCVA-------TVQPAPASQPNAGA---AAVPTECVFGQDIAKVSIGWQKFTYDELKHTVGCPEAYQAYATNPAALKD--RLDDPQTFEVFDKVYSLNGVFQKTKFPTQADEDNGXXXXXXXXXXXXXXXXFFSIFTHKMLKASYYSNGSHCSVGLGLMTRLNFLVGLGAAAAIVSFWWLIEGRFGDEDKALTAALEDTMFNECWSEQSPALQGVVVDQLDCPVRPWDFTGPGIALLCGIFQVALFLLMTLYMFWKAPTVEGVLDGSMDPTGVMLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAAAAMEGETDEAIXXXXXXXXXXNGSDTASSDYEAKEDPEMQGEDDLSMMQSEYTGHPADLEMIVEESEEDRTSSRFESEARYSAQGQEYSETYSDYDNR 463
            MGG  NAAVVAVGRTFFRV ++GY LSGLAMFP+VILG+  G+F+WEMDRC+CV        T QP  +S   +G    A   + CVFGQD AKVSIGW++FTYD+L HTVGCP A   Y  NPA   D   LD+ ++   FD+VY L+G FQKT  PTQADE NG                FFSI T+KMLKASY SNGSHCS+GL LMTRLN LVG+G AAAIVSFWWLIEGRFGDE KALT ALE+ +F+ECW E +         Q  CPVRPW FTGPG+ ++ GIFQV LFLLMTLYM WKAPTVEGVLDGSMDPTGV+LKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKA            XXXXXXXXXX GSDTASSDYEAK+DPEMQ  DDLS+MQSEY G PADLEMIVEESEEDRTSSR+ESE RYS     YS+TYSDY +R
Sbjct:    1 MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEAAATTGQPIVSSSSLSGTGTTAGASSSCVFGQDFAKVSIGWKEFTYDKLVHTVGCPIATAFYEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGGSEAGGGVVAMQVVLTFFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVSFWWLIEGRFGDEQKALTTALENILFDECWGETAD--DDAAGLQTFCPVRPWTFTGPGLPMMLGIFQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAX--XXXXXXXXXXXXXXXXXXXXGSDTASSDYEAKDDPEMQ--DDLSVMQSEYAG-PADLEMIVEESEEDRTSSRYESETRYS-HAPSYSDTYSDYGDR 468

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig58.12194.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig58.12194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LHX3_ECTSI	1.600e-200	68.28	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 294..471
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 272..293
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 180..199
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 220..271
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 157..179
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 200..219
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 39..156
None	No IPR available	TMHMM	TMhelix		coord: 271..293
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 153..175
None	No IPR available	TMHMM	TMhelix		coord: 197..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig58	contig	P-fluviatile_contig58:244619..255417 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig58.12194.1	mRNA_P-fluviatile_contig58.12194.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig58 244619..255870 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig58.12194.1 ID=prot_P-fluviatile_contig58.12194.1|Name=mRNA_P-fluviatile_contig58.12194.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=472bp
MGGTNAAVVAVGRTFFRVTLIGYALSGLAMFPAVILGLRNGFFQWEMDRC
SCVATVQPAPASQPNAGAAAVPTECVFGQDIAKVSIGWQKFTYDELKHTV
GCPEAYQAYATNPAALKDRLDDPQTFEVFDKVYSLNGVFQKTKFPTQADE
DNGGASAGGGVVAMLVICCFFSIFTHKMLKASYYSNGSHCSVGLGLMTRL
NFLVGLGAAAAIVSFWWLIEGRFGDEDKALTAALEDTMFNECWSEQSPAL
QGVVVDQLDCPVRPWDFTGPGIALLCGIFQVALFLLMTLYMFWKAPTVEG
VLDGSMDPTGVMLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMI
RPYPLPKSAKAAKAAAAMEGETDEAILAAAAAAAAANGSDTASSDYEAKE
DPEMQGEDDLSMMQSEYTGHPADLEMIVEESEEDRTSSRFESEARYSAQG
QEYSETYSDYDNRSSVDQARR*