prot_P-fluviatile_contig58.12188.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig58.12188.1
Unique Nameprot_P-fluviatile_contig58.12188.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length504
Homology
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BLAST of mRNA_P-fluviatile_contig58.12188.1 vs. uniprot
Match: A0A6H5L6U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U6_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.450e-41
Identity = 79/132 (59.85%), Postives = 96/132 (72.73%), Query Frame = 0 
Query:   19 TSPTTLGALRISIESGWISKVTALQLGCVDTLRSCRAFQGFRLRVARKTPLRVYEQKFRVGGSGDSGGSGASSRLILPRVLKLLYDRPHFDLKPGWGLPPELVGLVLGTQFEGDIDTVVWPHGLESVVFWRR 150
            T+ TTLGALR+ I SGW+++  +LQ+  V+TLRSCR    FRLR+ARKTP RVY+ KF  GG G       S  +ILPRV+++LYDR  FDLKPGW LP ELVGLVLGT+F GD+  V WP  L S+VFWRR
Sbjct:  296 TAATTLGALRVVIASGWVARTISLQVASVETLRSCREVANFRLRIARKTPRRVYQDKFAGGGRGR-----VSRSIILPRVVRVLYDRSEFDLKPGWALPVELVGLVLGTEFCGDLKGVPWPPTLSSIVFWRR 422
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BLAST of mRNA_P-fluviatile_contig58.12188.1 vs. uniprot
Match: D8LHW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW9_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.470e-41
Identity = 79/133 (59.40%), Postives = 97/133 (72.93%), Query Frame = 0 
Query:   19 TSPTTLGALRISIESGWISKVTALQLGCVDTLRSCRAFQGFRLRVARKTPLRVYEQKFRVGGSGDSGGSGASSRLILPRVLKLLYDRPHFDLKPGWGLPPELVGLVLGTQFEGDIDTVVWPHGLESVVFWRRY 151
            T+ TTLGALR+ I SGW+++  +LQ+  V+TLRSCR    FRLR+ARKTP RVY+ KF  GG G       S  +ILPRV+++LYDR  FDLKPGW LP ELVGLVLGT+F GD+  V WP  L S+VFWRR+
Sbjct:   23 TAATTLGALRVVIASGWVARTISLQVASVETLRSCREVANFRLRIARKTPRRVYQDKFAGGGHGR-----VSRSIILPRVVRVLYDRSEFDLKPGWALPVELVGLVLGTEFCGDLKGVPWPPTLSSIVFWRRF 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig58.12188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6U6_9PHAE1.450e-4159.85Reverse transcriptase domain-containing protein n=... [more]
D8LHW9_ECTSI1.470e-4159.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 116..372
e-value: 3.4E-8
score: 34.3
IPR008615FNIPPFAMPF05725FNIPcoord: 195..238
e-value: 2.5E-6
score: 27.5
coord: 329..370
e-value: 5.5E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 262..348
coord: 96..300
coord: 305..472
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 262..348
coord: 96..300
coord: 305..472
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 92..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig58contigP-fluviatile_contig58:191991..195198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig58.12188.1mRNA_P-fluviatile_contig58.12188.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig58 191073..195238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig58.12188.1 ID=prot_P-fluviatile_contig58.12188.1|Name=mRNA_P-fluviatile_contig58.12188.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=504bp
MATEEVVCSAGTSHVTPTTSPTTLGALRISIESGWISKVTALQLGCVDTL
RSCRAFQGFRLRVARKTPLRVYEQKFRVGGSGDSGGSGASSRLILPRVLK
LLYDRPHFDLKPGWGLPPELVGLVLGTQFEGDIDTVVWPHGLESVVFWRR
YNRTIDNVDWPHSLKKLTLSSSFNHSLIAAKWPPKLEVLSLGSWFDQPLS
AVHFPDGLTTLNLSRDFNQPLEGVLWPKRLARLTFGFFFNRSIEAAAESW
PSTLRYLSFGDCFNLPVRHAVWPRGLEEITFGRGFNQELEGVDWPPALRR
LKLGAMFNRDIAGARFPEEMEQLELGFAFNQPFAHVVLPGGLKRLIFGEE
FNRDIEAVSWPQGLEEIWLGVQFDKPVAAVAWPRGLRRLRFGEMFNHPLA
GVAFPYGLREVKFGKNFNHEVQAVRWPDTLQVMAFGELFNQPISGVVWPE
SLKTLQLGCEFDRRMLEGVAFPPDLGIEVVDSYRQVGDADDCAAREDSPC
HNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP