prot_P-fluviatile_contig57.12124.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig57.12124.1
Unique Name	prot_P-fluviatile_contig57.12124.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	181

Homology

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: D8LBD3_ECTSI (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD3_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 3.460e-126
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDFL 180
            MRPLTDDETKVLFEKLANYIGKNIEQLINR DEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTE+CKDLDPTAVVVLHQADVGEYLRVEDD L
Sbjct:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDLL 180

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A835ZB99_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB99_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.860e-103
Identity = 148/180 (82.22%), Postives = 161/180 (89.44%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDFL 180
            MRPLTD+ET  LFEKLANYIGK+IE+LINR DE  CFRLHKDRVYYVSERLMRQ+T+VSRD LLSLGTCFGKFTK+ KFRL IT LDYISQYAK+KVWVKP AEMSFLYGNHV KSGL RITE TP+Y G VVYSM+D+P+GFGVAAQ TEYC+DLD  AVVVLHQAD+GEYLRVEDD L
Sbjct:    1 MRPLTDEETATLFEKLANYIGKDIEKLINRPDEAYCFRLHKDRVYYVSERLMRQSTNVSRDNLLSLGTCFGKFTKTKKFRLGITCLDYISQYAKHKVWVKPGAEMSFLYGNHVAKSGLARITEATPQYAGVVVYSMNDIPMGFGVAAQATEYCRDLDAAAVVVLHQADIGEYLRVEDDGL 180

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: B5Y3S4_PHATC (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3S4_PHATC)

HSP 1 Score: 283 bits (725), Expect = 1.560e-95
Identity = 136/179 (75.98%), Postives = 158/179 (88.27%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDD 178
            MRPLT++ETK LF KL+ YIGKNIE+LINRSDE+ CFRL KDR YY+SE +M+ ATS+ R+ LL +GTC GKFTK+GKFRLHITAL+YISQYAKYKVWVKPSAEMSFLYGNHV K+GL R+TENTP+Y G VVYSMSD+PLGFGVAAQ TE+C+ LDPT  VVLHQAD+GEYLR +E+D
Sbjct:    1 MRPLTEEETKSLFLKLSEYIGKNIERLINRSDERHCFRLIKDRCYYISESIMKSATSIGREHLLHVGTCMGKFTKTGKFRLHITALEYISQYAKYKVWVKPSAEMSFLYGNHVSKNGLARMTENTPQYSGVVVYSMSDIPLGFGVAAQSTEHCQQLDPTGNVVLHQADIGEYLRGLEED 179

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A7S2S5A9_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A9_9STRA)

HSP 1 Score: 281 bits (720), Expect = 9.000e-95
Identity = 135/179 (75.42%), Postives = 157/179 (87.71%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDD 178
            MRPLT+DETK+LF+KLA YIGK+IEQ+INR DE+ CFRL KDRVYYVSE  M+ + S+SRD +L  GTC GKF+KSGKFRLH+TALDY+SQYAKYKVWVKPSAEMSFLYGN++ KSGL RITE+TP+Y G VVY+MSD+PLGFGV+AQ TE CKDL+P   VVLHQAD+GEYLR VEDD
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGKSIEQMINRKDERHCFRLMKDRVYYVSESAMKYSASISRDNILHFGTCLGKFSKSGKFRLHVTALDYLSQYAKYKVWVKPSAEMSFLYGNNILKSGLARITESTPQYAGVVVYNMSDLPLGFGVSAQNTEACKDLEPMGNVVLHQADIGEYLRGVEDD 179

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A7S3PW11_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW11_9STRA)

HSP 1 Score: 276 bits (707), Expect = 8.900e-93
Identity = 136/180 (75.56%), Postives = 160/180 (88.89%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLH-KDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDD 178
            MRPLT+DETK+LF+KLA YIG++IE++INRSDE+ CFRL  K+RVYYVSE +M+ + SV+RD LLS GTC GKFTKSGKFRLHITALDY+SQYA+YKVWVKPSAEMSFLYGN+V KSGL RITE+TP+Y G VVYSMSD+PLGFGVA+Q T+ CKDL+P   VVLHQAD+GEYLR +EDD
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGRSIEKMINRSDERHCFRLAAKNRVYYVSESVMKASNSVARDNLLSFGTCLGKFTKSGKFRLHITALDYLSQYAQYKVWVKPSAEMSFLYGNNVLKSGLARITESTPQYAGIVVYSMSDIPLGFGVASQGTDACKDLEPMGNVVLHQADIGEYLRGMEDD 180

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: NIP7_XENTR (60S ribosome subunit biogenesis protein NIP7 homolog n=13 Tax=Sarcopterygii TaxID=8287 RepID=NIP7_XENTR)

HSP 1 Score: 273 bits (699), Expect = 1.370e-91
Identity = 127/177 (71.75%), Postives = 153/177 (86.44%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVED 177
            MRPLTD+ETK +FEKL+ YIG+NI+ L++R D   CFRLH DRVYYVSER+++ AT+++RD L+SLGTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITENT +Y G VVYSM+D+PLGFGVAA+ T+ C+ LDP A+VV HQADVGEY+R ED
Sbjct:    1 MRPLTDEETKAMFEKLSKYIGENIKLLVDRPDGTYCFRLHNDRVYYVSERILKLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEYIRHED 177

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A1E7FIQ9_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FIQ9_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.420e-91
Identity = 126/180 (70.00%), Postives = 159/180 (88.33%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDF 179
            MRPLT++ETK LF KL+ YIGKN+E++INRSDE+ CFRL KDR YYVSE LM+ A+S++RD+LL++GTC GKFTKSGKFRLHIT+L+Y+S+YAKYKVWVK +AEMSFLYGNH+ KSGL R+TENTP+Y G +VY+M+D+P+GFGVAAQ TE+C+ L+    VVLHQAD+G+YLR +EDDF
Sbjct:    1 MRPLTEEETKTLFLKLSEYIGKNVEKMINRSDERYCFRLMKDRCYYVSESLMKAASSIARDSLLAVGTCIGKFTKSGKFRLHITSLEYLSKYAKYKVWVKQNAEMSFLYGNHITKSGLARMTENTPQYSGVIVYNMADIPMGFGVAAQSTEHCQQLESNGNVVLHQADIGDYLRGLEDDF 180

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A8C4T854_ERPCA (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T854_ERPCA)

HSP 1 Score: 273 bits (697), Expect = 2.770e-91
Identity = 127/177 (71.75%), Postives = 154/177 (87.01%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVED 177
            MRPLTD+ETK LFEK++ YIG+NI+ L++R D   CFRLHKDRVYY+SE+L++ +T++SRD L+S+GTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITENT +Y G VVYSM+DVPLGFGVAA+ T+ C+ LDP A+VV HQAD+GEYLR ED
Sbjct:    1 MRPLTDEETKALFEKVSKYIGENIKLLVDRPDGVYCFRLHKDRVYYLSEKLLKLSTNISRDKLISVGTCFGKFTKTMKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKLDPMAIVVFHQADIGEYLRSED 177

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: B8BPY5_THAPS (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPY5_THAPS)

HSP 1 Score: 273 bits (697), Expect = 2.870e-91
Identity = 129/179 (72.07%), Postives = 159/179 (88.83%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDD 178
            MRPLT++ETK LF+KLA Y+G+++E+LINRSDE+ CFRL KDRVYY+SE +M+ +TS+++D LL  GTC GKFTKSGKFRLHITALDY++QY+KYKVW+K SAEMSFLYGN+V KSGL RITE TP+Y G VVY++SD+PLGFGVAAQ T+ CK+LDPTA VVLHQADVGE+LR +E+D
Sbjct:    1 MRPLTEEETKTLFQKLAEYMGRSVERLINRSDERHCFRLIKDRVYYISESVMKASTSINKDNLLHCGTCLGKFTKSGKFRLHITALDYLAQYSKYKVWLKQSAEMSFLYGNNVIKSGLARITEGTPQYAGVVVYNLSDIPLGFGVAAQTTDACKELDPTANVVLHQADVGEFLRGLEED 179

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BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Match: A0A6I9Z2T1_9SAUR (60S ribosome subunit biogenesis protein NIP7 homolog n=21 Tax=Sauria TaxID=32561 RepID=A0A6I9Z2T1_9SAUR)

HSP 1 Score: 272 bits (695), Expect = 5.590e-91
Identity = 126/177 (71.19%), Postives = 155/177 (87.57%), Query Frame = 0

Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVED 177
            MRPLT+DET+VLFEKLA Y+G+NI+ L++R D   CFRLHKDRVYY+SERL++ AT++ RD+L+SLGTCFGKFTK+ KFRLHITALDY++ YAKYKVWVKP AE SFLYGNH+ KSGLGRITE+T +Y G VVYSM+DVPLGFGVAA+ T+ C+ +DP A+VV HQAD+GEY+R E+
Sbjct:    1 MRPLTEDETRVLFEKLARYVGENIQLLVDRPDGTYCFRLHKDRVYYLSERLLKLATNIPRDSLVSLGTCFGKFTKTQKFRLHITALDYLAPYAKYKVWVKPGAEQSFLYGNHLLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKTTQECRKVDPMAIVVFHQADIGEYIRHEE 177

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig57.12124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBD3_ECTSI	3.460e-126	98.33	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A835ZB99_9STRA	1.860e-103	82.22	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
B5Y3S4_PHATC	1.560e-95	75.98	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A7S2S5A9_9STRA	9.000e-95	75.42	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A7S3PW11_9STRA	8.900e-93	75.56	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
NIP7_XENTR	1.370e-91	71.75	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A1E7FIQ9_9STRA	1.420e-91	70.00	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A8C4T854_ERPCA	2.770e-91	71.75	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
B8BPY5_THAPS	2.870e-91	72.07	60S ribosome subunit biogenesis protein NIP7 homol...	[more]
A0A6I9Z2T1_9SAUR	5.590e-91	71.19	60S ribosome subunit biogenesis protein NIP7 homol...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 95..170 e-value: 6.2E-9 score: 45.7
IPR002478	PUA domain	PROSITE	PS50890	PUA	coord: 94..170 score: 11.488
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10		coord: 94..180 e-value: 3.9E-41 score: 140.9
IPR016686	Ribosome biogenesis factor, NIP7	PIRSF	PIRSF017190	NIP7	coord: 1..180 e-value: 9.0E-86 score: 283.8
IPR005155	UPF0113, PUA domain	PFAM	PF03657	UPF0113	coord: 96..174 e-value: 1.6E-22 score: 79.5
IPR040598	UPF0113, pre-PUA domain	PFAM	PF17833	UPF0113_N	coord: 2..83 e-value: 2.8E-33 score: 114.3
None	No IPR available	GENE3D	3.10.450.220		coord: 1..93 e-value: 7.0E-44 score: 149.7
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 1..178
None	No IPR available	PANTHER	PTHR23415:SF4	60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 HOMOLOG	coord: 1..178
None	No IPR available	SUPERFAMILY	88802	Pre-PUA domain	coord: 1..94
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 95..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig57	contig	P-fluviatile_contig57:373076..374950 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig57.12124.1	mRNA_P-fluviatile_contig57.12124.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig57 373020..375719 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig57.12124.1 ID=prot_P-fluviatile_contig57.12124.1|Name=mRNA_P-fluviatile_contig57.12124.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=181bp
MRPLTDDETKVLFEKLANYIGKNIEQLINRSDEKCCFRLHKDRVYYVSER
LMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVK
PSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPT
EYCKDLDPTAVVVLHQADVGEYLRVEDDFL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002478	PUA
IPR036974	PUA_sf
IPR016686	Ribosomal_synth_fac_NIP7
IPR005155	UPF0113_PUA
IPR040598	UPF0113_N
IPR015947	PUA-like_sf