prot_P-fluviatile_contig57.12121.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig57.12121.1
Unique Nameprot_P-fluviatile_contig57.12121.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length284
Homology
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: D8LBD7_ECTSI (GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD7_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 3.790e-146
Identity = 219/281 (77.94%), Postives = 243/281 (86.48%), Query Frame = 0
Query:    1 MTCAMRSIFAVAAMIATYEVNGFVQPTSLTSLAGRTTVVAPVCHSVQKNSRRWEKAQQADMGAGEAGEAHEQAGGPFSSWVKKAAGRIGRGPFSRPATKEDQVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
            M+CAMRS+FAVAAM+A  E   FV P  LTSLAGR+ V AP C SV+++SRRW+KAQQ D G G+ G + EQ  GPFSSWVKK AGR GRGPFSR A K+D+VDDLLNS+AFL KKVEMLQKQI AT+ D V+AQAQADEQW EWGPQV+RLEKEF+ALK RG E RTQAY+KGKA+AIN+ILGVADNFERAAGAIS ETDGERAVVAYYKD YD +MKCLEGL L EVDTIGAPFDYNIHNAIMRENT++F EDVVCKVFQKGYQVG+TLVRPAMVAVAV
Sbjct:    1 MSCAMRSLFAVAAMLAANEACAFVHPAGLTSLAGRS-VAAPACTSVERSSRRWDKAQQLDAGNGDGGSSGEQPAGPFSSWVKKTAGRFGRGPFSR-AAKKDEVDDLLNSDAFLNKKVEMLQKQINATQADIVTAQAQADEQWAEWGPQVQRLEKEFSALKGRGGEARTQAYNKGKAEAINNILGVADNFERAAGAISAETDGERAVVAYYKDTYDNMMKCLEGLDLVEVDTIGAPFDYNIHNAIMRENTDEFPEDVVCKVFQKGYQVGDTLVRPAMVAVAV 279          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A835ZCF7_9STRA (GrpE protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.180e-54
Identity = 94/178 (52.81%), Postives = 129/178 (72.47%), Query Frame = 0
Query:  103 VDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVA 280
            VDDLL S AFL KKVE+L+KQ+  TE++  +A A+AD++W+EWGPQ++RLE EF  LK R      +A ++ K +A+  IL V DNFERA+ AI  +TDGE+AVVAYYK  Y+ +    + LG+  V T+G PFDYN+H A+MR+ + + EED+V + F KG+ VG TL+RPAMVAV+
Sbjct:   63 VDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 240          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: H6WB81_VAULI (GrpE protein homolog n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB81_VAULI)

HSP 1 Score: 170 bits (431), Expect = 1.750e-48
Identity = 83/177 (46.89%), Postives = 123/177 (69.49%), Query Frame = 0
Query:  104 DDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVA 280
            DDLL +  FL KK+E+L KQI   E++  +A  +AD++W+EWGPQ+ RLE+EF  +++R      +A    K + + +IL V+DNF RA+ AISP T+GE AVV YYK  Y+++      LG+  + T+G PFDYN+H A+MR+++ +F+ED+VC    KG+ VG+ L+RPAMVAV+
Sbjct:   68 DDLLQTPQFLTKKIEVLNKQIAKKEEEISAANLEADKEWEEWGPQIERLEREFENVRARMLNDTMEASTSAKVKVLKEILAVSDNFMRASQAISPSTEGEIAVVDYYKSIYEEMQAVFVALGMKPIATVGEPFDYNLHEAVMRQSS-EFDEDIVCLELTKGFMVGKELIRPAMVAVS 243          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A448ZSA7_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSA7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.840e-44
Identity = 77/179 (43.02%), Postives = 122/179 (68.16%), Query Frame = 0
Query:  103 VDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
             DD+L+S AFLK+KVE+L+  I  TE+D V+A  + +   +EWGPQ+  LE+E+  ++ R +E   +     K + +  IL + DNF+RA+G I  ET+ ++A+ A YK AY  ++   + +G+TEV+T+G  FDY +H A+M+   +++EE  VC+ FQKG+ +GE+L+RPAMVAVA+
Sbjct:   70 ADDILSSPAFLKRKVEVLESDIAKTEEDLVAATERKEIAKEEWGPQLEALEREYTNIQQRMTEQNQEGDSDAKVRVVKGILDLLDNFDRASGVIVAETEADQAIEAAYKQAYQDILDKFKEMGVTEVETVGTEFDYELHQAVMQMPGSEYEEGFVCQEFQKGFIMGESLIRPAMVAVAI 248          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A7S4AM71_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AM71_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.910e-41
Identity = 75/179 (41.90%), Postives = 119/179 (66.48%), Query Frame = 0
Query:  103 VDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
            V+D+L+S AFLK+K+E+L+  I  TE++ V+A  + +   +EWGPQ+  L++E+  ++ R +E         K + +  IL + DNF+RA+G I  ET+ E+ + A YK AY  ++     +G+TEV+T+G  FDY +H A+M+    ++EE VVCK FQKG+ + E+L+RPAMVAVA+
Sbjct:   70 VNDILSSPAFLKRKLEVLESDIATTEEELVAATERKEIAKEEWGPQIEALQREYTNIQQRMTEQNQVGDSDAKVRVVKGILDLLDNFDRASGVIVAETEVEQTIEAGYKQAYQDILDQFAEMGVTEVETLGTEFDYELHQAVMQMPGTEYEEGVVCKEFQKGFIMDESLIRPAMVAVAL 248          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A7S2V1T8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1T8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 6.070e-40
Identity = 69/181 (38.12%), Postives = 116/181 (64.09%), Query Frame = 0
Query:  100 EDQVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVA 280
            E  VDDLLN+ AFL+KK+E L K +   ++    A A+A ++W+EWGPQ+ R ++E+ AL++R      +A    K + + ++L   DNF+RA  A  P+++ E+A +  Y   +D L +    LG+ E+ T+G PFD+N+H+A+M++ ++++ ED +C  + KGY V   ++RPAMV V+
Sbjct:  115 EVSVDDLLNTPAFLQKKIEALNKSMVKVQEQIDEADAEAAKEWEEWGPQISRAKREYQALRARMVNATMEASTTAKVKCLKEVLQAYDNFQRAQAAFKPQSEDEQAALDQYTKMFDDLNEVFTKLGMKEIPTVGEPFDFNLHSAVMQQPSDEYPEDTICLEYAKGYMVDGEMIRPAMVVVS 295          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A7S0UHW3_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UHW3_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.130e-39
Identity = 75/199 (37.69%), Postives = 123/199 (61.81%), Query Frame = 0
Query:   93 FSRPATKEDQVD----------DLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
            F+   T E+Q +          D+LNS AFLK+K+E+L+  I   ++D  +A  + +   +EWGPQ+  L++E+  ++ R +E   +     K + +  +L + DNF+RA+G I  ETD E+ + A YK AY  ++   + +G+ EV+T+G+ FDY +H A+M+    ++EE  VC+ FQKG+ +GE L+RPAMVAVA+
Sbjct:   86 FAEEETAEEQTEESGDASADSNDILNSPAFLKRKLEVLESDIATADEDLAAATERKEVAKEEWGPQLEALQREYQNIQQRMTEQNQEGDSDAKVRVVKGVLDLLDNFDRASGVIVAETDEEKQIEAEYKQAYQDILDQFKKMGVMEVETVGSEFDYELHQAVMQMPGTEYEEGYVCQEFQKGFIMGEALIRPAMVAVAL 284          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A1Z5KT30_FISSO (GrpE protein homolog n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT30_FISSO)

HSP 1 Score: 145 bits (367), Expect = 2.510e-39
Identity = 72/180 (40.00%), Postives = 114/180 (63.33%), Query Frame = 0
Query:  102 QVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
            + +D+LNS AFL++K E+LQ  ++  ED   +AQ + +E   EWGPQ+  L+ E+  ++ R +E           Q   ++L V DNF+RA GA+ P  D E A+ A YK  Y  ++     +G+ E+ T+G  FDY +H A+M++ ++++EE +VC+ FQKG++ G++LVR AMVAVAV
Sbjct:   33 ESNDILNSPAFLQRKFEVLQTDLQKAEDALAAAQQRLEEGKAEWGPQLADLQTEYQNIQKRMNEQSKGGDSMATVQVARNMLNVLDNFDRAFGAVQPSNDEELAIEAEYKGTYQMMLDAFAEMGVEEIPTVGVEFDYQVHQAVMQKPSDEYEEGIVCEEFQKGFKCGDSLVRAAMVAVAV 212          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A7S2VF25_9STRA (GrpE protein homolog n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF25_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.400e-38
Identity = 72/184 (39.13%), Postives = 116/184 (63.04%), Query Frame = 0
Query:   97 ATKEDQVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVA 280
            A  +    D+LNS AFL++K+E+LQ  I   E DT  A+A+ +    EWG Q+  L+KE+  ++ R +    Q       Q   ++L V DN++RA GA++P  D E  + A YK  +D +M+    LG+ E+ T+G  FDY +H A+M++ ++++EE +VC+ FQKG+++G+TL+R +MVAVA
Sbjct:   83 APTDSGASDILNSPAFLQRKLEVLQSDIAKVEADTEEARARLEAGKAEWGGQLDELQKEYQNIQERLNSQNKQGDTMAIVQVTREMLKVLDNYDRAFGAVTPSGDIEAEIEADYKSTWDDIMQTFSDLGVEEIKTVGVEFDYEVHQAVMQKPSDEYEEGIVCEEFQKGFKIGDTLIRASMVAVA 266          
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Match: A0A1Z5KJD1_FISSO (Molecular chaperone GrpE n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJD1_FISSO)

HSP 1 Score: 140 bits (353), Expect = 3.420e-37
Identity = 73/180 (40.56%), Postives = 113/180 (62.78%), Query Frame = 0
Query:  102 QVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVRRLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPETDGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTNDFEEDVVCKVFQKGYQVGETLVRPAMVAVAV 281
            + +D+LNS AFL++K E+LQ  ++  ED    AQ + +E   EWGPQ+  L+ E+  ++ R +E           Q   ++L V DNF+RA GA+ P T+ E A+ A YK  Y  ++     +G+ EV TIG  FD+ +H A+M++ ++++EE +VC+ FQKG++ G +LVR AMVAVAV
Sbjct:   37 ESNDILNSPAFLQRKFEVLQTDLQKAEDALAVAQQRLEEGKAEWGPQLADLQIEYQNIQKRMNEQSKGGDSMATVQVARNMLNVLDNFDRAFGAVQPLTETEFAIEAEYKVTYQMMLDAFTEMGVEEVPTIGTEFDFQVHQAVMQKPSDEYEEGIVCEEFQKGFKCGNSLVRAAMVAVAV 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig57.12121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD7_ECTSI3.790e-14677.94GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835ZCF7_9STRA3.180e-5452.81GrpE protein homolog n=1 Tax=Tribonema minus TaxID... [more]
H6WB81_VAULI1.750e-4846.89GrpE protein homolog n=1 Tax=Vaucheria litorea Tax... [more]
A0A448ZSA7_9STRA5.840e-4443.02GrpE protein homolog n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S4AM71_9STRA7.910e-4141.90GrpE protein homolog n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2V1T8_9STRA6.070e-4038.12Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0UHW3_9STRA1.130e-3937.69GrpE protein homolog n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1Z5KT30_FISSO2.510e-3940.00GrpE protein homolog n=1 Tax=Fistulifera solaris T... [more]
A0A7S2VF25_9STRA4.400e-3839.13GrpE protein homolog n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5KJD1_FISSO3.420e-3740.56Molecular chaperone GrpE n=1 Tax=Fistulifera solar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..137
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 178..193
score: 41.8
coord: 233..248
score: 38.28
coord: 260..279
score: 47.81
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 111..280
e-value: 1.5E-33
score: 115.8
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 58..281
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 236..279
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 54..281
score: 13.728
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 97..224
e-value: 3.5E-8
score: 35.0
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 134..225
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10coord: 225..280
e-value: 1.6E-17
score: 65.0
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 227..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig57contigP-fluviatile_contig57:359487..363986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig57.12121.1mRNA_P-fluviatile_contig57.12121.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig57 359487..363986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig57.12121.1 ID=prot_P-fluviatile_contig57.12121.1|Name=mRNA_P-fluviatile_contig57.12121.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=284bp
MTCAMRSIFAVAAMIATYEVNGFVQPTSLTSLAGRTTVVAPVCHSVQKNS
RRWEKAQQADMGAGEAGEAHEQAGGPFSSWVKKAAGRIGRGPFSRPATKE
DQVDDLLNSEAFLKKKVEMLQKQIKATEDDTVSAQAQADEQWKEWGPQVR
RLEKEFAALKSRGSEVRTQAYDKGKAQAINDILGVADNFERAAGAISPET
DGERAVVAYYKDAYDKLMKCLEGLGLTEVDTIGAPFDYNIHNAIMRENTN
DFEEDVVCKVFQKGYQVGETLVRPAMVAVAVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil
IPR009012GrpE_head