prot_P-fluviatile_contig57.12073.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig57.12073.1
Unique Nameprot_P-fluviatile_contig57.12073.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length72
Homology
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BLAST of mRNA_P-fluviatile_contig57.12073.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.750e-7
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    6 RLSSKTFSLGSKHIDNHVLKTAEHVFDQLHHVGASTYA 43
            RLS+K  SLG +HID+HVLKTAEHVF QL  VGASTYA
Sbjct:  702 RLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYA 739
[Close]
BLAST of mRNA_P-fluviatile_contig57.12073.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 8.260e-7
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    7 LSSKTFSLGSKHIDNHVLKTAEHVFDQLHHVGASTYA 43
            LS+K  SLG +HID+HVLKTAEHVF QL  VGASTYA
Sbjct:  357 LSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYA 393
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig57.12073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE1.750e-776.32SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEJ0_9PHAE8.260e-775.68SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig57contigP-fluviatile_contig57:103..2058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig57.12073.1mRNA_P-fluviatile_contig57.12073.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig57 103..2058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig57.12073.1 ID=prot_P-fluviatile_contig57.12073.1|Name=mRNA_P-fluviatile_contig57.12073.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=72bp
IHDQSRLSSKTFSLGSKHIDNHVLKTAEHVFDQLHHVGASTYAKATPFRN
RTSPPRVDRLPNKIFCPAKPRH
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