prot_P-fluviatile_contig56.12031.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.12031.1
Unique Nameprot_P-fluviatile_contig56.12031.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length505
Homology
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.980e-81
Identity = 203/476 (42.65%), Postives = 248/476 (52.10%), Query Frame = 0
Query:   60 SADNEPWDPFSSKDTGKNAFARLHRGAAXXXXXXXXXXXXXXXXXXXXXXTWRDPSRSQFSSCWDPFASSSTTEGKENRGNAF-------------SKLLAAPSEQRSTHGGRRRSSVGALGKKSKLTGLGGGSSAESAEAATRFCECPVCGKRVIIEFCSKHLDTECSGREIHASSSAPAHDRPGTTAPFSTALFKPASPALAFADKPSA-----CQHLVAKPPAGAEVGEIVTERLSTSPPKPAAAALPAQDAT-GRSETPVDGSAVTKGAVRSPSTSTAALAVAA-------------APTAAEGNPAEGKLTTASAAGRVLTTCPVCGKSVRADLCSWHLDTECVGANPPPSVAPPARQGKSIHGDRGDTQGAGEGGGADSGEAALKKSAGNEAAGGLTALAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYRKMS 503
            SA+ E WDPF S D  ++AFARL   A                       +   P+    SS WDPFAS  T +GK                    SK  + PS  +     R+R +VG+    +   G      A +AEA TRFCECPVCGKRV+IE CSKHLDTEC+G +    ++      P + A  S    +P  PA      PSA     C+ ++A PP   E G+    R  T       AA  A+DA  G+ + P  G A +  A  + ST  A  A  A                    + A        AA   +T CPVCGK ++ADLCS HLDT+C G  P          G  +  +  D  G+G GG ADSG+A  KK  G+EAAGGL ALAAELTCP+CLCVFED HS+PCSHRFCLECI+GCFKSSKRQECPLCKIPAWKRDLTRDV +QNII AYR+M+
Sbjct:   27 SAEKEAWDPFGS-DCREDAFARLLSAA------------NRPAGSSTTTASTSQPAAGPASSSWDPFAS--TGDGKXXXXXXXXXXXXXXXXXXXXSKGRSGPSSAK-----RKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATETAKSPLSAATESRGASEPIPPAT---PPPSALAAGSCRSVLASPPL--EEGKGDDSRART-------AARVAEDAPRGQGQQP-SGDAASSSARAAASTFPAPAASPAFEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAAAEAMTACPVCGKQIQADLCSLHLDTDCSGVTP---------SGGGLKEEVRDEVGSGNGGEADSGKAVPKKDVGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMA 460          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.030e-60
Identity = 101/152 (66.45%), Postives = 115/152 (75.66%), Query Frame = 0
Query:  352 LTTCPVCGKSVRADLCSWHLDTECVGANPPPSVAPPARQGKSIHGDRGDTQGAGEGGGADSGEAALKKSAGNEAAGGLTALAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYRKMS 503
            +TTCPVCG+ V+ADLCS HLDT+C G      V               D  G+G GG ADSG+   K+  G+EAAGGL ALAAELTCP+CLCVFED HS+PCSHRFCLECI+GCFKSSKRQECPLCKIPAWKRDLTRDV +QNII AYR+M+
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRKEEVR--------------DEVGSGNGGEADSGKTVPKRDTGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMA 138          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 77.4 bits (189), Expect = 2.510e-11
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  429 LTALAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNII 496
            L  L AEL C +CL  F+D HS+PC H FCL CI+    +++  +CPLC+ PAW+R L ++ +L NI+
Sbjct:  485 LACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 57.8 bits (138), Expect = 4.650e-6
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0
Query:  432 LAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYRKMS 503
            LA +LTCPVCL +F D  S+ C H FC  CI GC++  +   CP C+     R+L     L N+    R +S
Sbjct:   10 LAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A835YNS0_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.160e-6
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 0
Query:  435 ELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAY 499
            EL CPVCL  F +  ++PC+H  C +C +    ++    CP C+    KR L R+V +QN++ A+
Sbjct:    4 ELKCPVCLSYFNNPTNLPCNHPLCEQCALQILANTTHNCCPTCRQEFNKRQLGRNVWIQNVMTAF 68          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 57.8 bits (138), Expect = 8.000e-6
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0
Query:  432 LAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYRKMS 503
            LA +LTCPVCL +F D  S+ C H FC  CI GC++  +   CP C+     R+L     L N+    R +S
Sbjct:   10 LAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A7S3GHT1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GHT1_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 2.530e-5
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0
Query:  435 ELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNII 496
            E++C +CLC +E+   + C H FC  CI+   + +    CPLCK   WKR LT D +L ++I
Sbjct:   43 EMSCSICLCEYENPQVLRCGHVFCNACILRSLRETSA--CPLCKSDCWKRSLTYDAKLSDLI 102          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: A0A4W3GVR5_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GVR5_CALMI)

HSP 1 Score: 56.6 bits (135), Expect = 4.970e-5
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0
Query:  432 LAAELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYRKMS 503
            LA +LTCPVCL +F D  S+ C H FC  CI GC++  +   CP C+     R+L     L N+    R +S
Sbjct:   10 LAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHFCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: UPI001BD69A3A (nuclear factor 7, ovary-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD69A3A)

HSP 1 Score: 57.0 bits (136), Expect = 5.270e-5
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0
Query:  435 ELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCK 478
            +L+CPVCL +FED   + CSH FC EC+   +K  K +ECP+CK
Sbjct:    8 DLSCPVCLDIFEDPVILSCSHSFCRECVEKSWKEKKDKECPICK 51          
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Match: UPI001BD33D56 (nuclear factor 7, brain-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD33D56)

HSP 1 Score: 56.6 bits (135), Expect = 6.810e-5
Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 0
Query:  435 ELTCPVCLCVFEDVHSMPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNI 495
            +L+CPVCL +FED   + CSH FC EC+   +K  + +ECP+CK    K  L  +  ++N+
Sbjct:    8 DLSCPVCLDIFEDPVMLSCSHSFCRECVEKSWKEKEDKECPICKRRHSKGSLPPNFAVKNL 68          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.12031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE1.980e-8142.65RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI7.030e-6066.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT2.510e-1147.06RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A4W3GZY8_CALMI4.650e-640.28Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
A0A835YNS0_9STRA6.160e-636.92RING-type domain-containing protein (Fragment) n=1... [more]
UPI001C3FC9B58.000e-640.28nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
A0A7S3GHT1_9EUKA2.530e-540.32Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A4W3GVR5_CALMI4.970e-540.28Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
UPI001BD69A3A5.270e-552.27nuclear factor 7, ovary-like n=1 Tax=Cheilinus und... [more]
UPI001BD33D566.810e-540.98nuclear factor 7, brain-like n=1 Tax=Cheilinus und... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006642Zinc finger, Rad18-type putativeSMARTSM00734c2hc_5coord: 191..215
e-value: 0.98
score: 11.7
coord: 352..376
e-value: 0.021
score: 23.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 438..477
e-value: 9.6E-5
score: 31.8
coord: 194..358
e-value: 16.0
score: 0.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 438..478
score: 11.899
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 438..477
e-value: 7.1E-7
score: 29.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 418..504
e-value: 6.0E-18
score: 66.5
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 424..503
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 424..503
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 453..462
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 433..501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:679548..682965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.12031.1mRNA_P-fluviatile_contig56.12031.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 679548..683431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.12031.1 ID=prot_P-fluviatile_contig56.12031.1|Name=mRNA_P-fluviatile_contig56.12031.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=505bp
MPGGLAAWLDDQPKPPATAAAAAAAAAAAAAAAFVIEVDAGSPSDGKAAG
GGRANHLLASADNEPWDPFSSKDTGKNAFARLHRGAAASSNPPPATPSSR
ASASTPPPPTWRDPSRSQFSSCWDPFASSSTTEGKENRGNAFSKLLAAPS
EQRSTHGGRRRSSVGALGKKSKLTGLGGGSSAESAEAATRFCECPVCGKR
VIIEFCSKHLDTECSGREIHASSSAPAHDRPGTTAPFSTALFKPASPALA
FADKPSACQHLVAKPPAGAEVGEIVTERLSTSPPKPAAAALPAQDATGRS
ETPVDGSAVTKGAVRSPSTSTAALAVAAAPTAAEGNPAEGKLTTASAAGR
VLTTCPVCGKSVRADLCSWHLDTECVGANPPPSVAPPARQGKSIHGDRGD
TQGAGEGGGADSGEAALKKSAGNEAAGGLTALAAELTCPVCLCVFEDVHS
MPCSHRFCLECIMGCFKSSKRQECPLCKIPAWKRDLTRDVQLQNIILAYR
KMSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006642Znf_Rad18_put
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR031099BRCA1-associated
IPR011364BRCA1
IPR017907Znf_RING_CS