prot_P-fluviatile_contig56.12022.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.12022.1
Unique Nameprot_P-fluviatile_contig56.12022.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length210
Homology
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BLAST of mRNA_P-fluviatile_contig56.12022.1 vs. uniprot
Match: D8LC60_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC60_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.360e-60
Identity = 121/212 (57.08%), Postives = 143/212 (67.45%), Query Frame = 0 
Query:    1 MLREGVSVRIRGHGERTLAVKFRDAETVADFKARVFGDEIAKGKKCRLIASGKELQDFQQMGFYRLQQDACLHVMINQRAAAAPA----PAASATPPTSVPESASTIGAQPPPGPGVRPAATRTVSEGREVAILCALTLAMVIAAWTARMTFPDFFSSEATGLLLLLTSLQLAATLPLLKKALLAALGACSCWWRPSXXXXRAARAPGRRRQ 208
            M R  VSVR+RG  E TL V+F DAETVADFK RVFGD I +GK+CRLIASGKELQD  +MG YR+Q+ +C+HVMI+QR + A A    P A+A PP++   ++S                +R V  G   AILCALTL MV+AAWT  M FP+ FS  AT LLLLLT LQLAATLP+LK+AL AALGAC  WWRP     R +  PGRRRQ
Sbjct:    1 MSRPAVSVRVRGRDETTLEVQFDDAETVADFKTRVFGDVIGEGKRCRLIASGKELQDSHKMGSYRIQEGSCMHVMISQRGSVAGAERGTPCAAAVPPSAAASTSS----------------SRGVGRGAGSAILCALTLGMVMAAWTVYMVFPELFSCAATCLLLLLTLLQLAATLPILKQALSAALGAC--WWRP--WVRRPSSVPGRRRQ 192
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BLAST of mRNA_P-fluviatile_contig56.12022.1 vs. uniprot
Match: A0A8K1FSI8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FSI8_PYTOL)

HSP 1 Score: 54.7 bits (130), Expect = 1.260e-5
Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 0 
Query:    6 VSVRIRGHGERTLAVKFRDAETVADFKARVFGDEIAKGKKCRLIASGKELQDFQQMGFYRLQQDACLHVMINQRAAAAPAPAASATPPTSVPESASTIGAQPPPGPGV-RPAATRTVSEGREVAILCALTLAMVIAAWTARMTFPDFFSSEATGLLLLLTSLQLAAT 171
            + +R+R  GE+     F+  + V DF  + FG+E+A+GK+ RLI  G  L   + MG Y ++++  +HV+IN             +PP   PE++  +  +     G+  PA T  +S G    IL  L        WT    FP  FS +A  LL LL+ + ++AT
Sbjct:   72 LQIRVRV-GEQVRPAYFKATQHVDDFTTKFFGEELAEGKRIRLIYMGMLLIQDRTMGEYGIEENGVIHVVIND------------SPPQPHPEASQVVELK-----GLANPANTLLISTGF---ILYGL--------WTLFYHFPHLFSWKAIVLLALLSVVHISAT 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.12022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC60_ECTSI6.360e-6057.08Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A8K1FSI8_PYTOL1.260e-531.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 6..77
e-value: 0.004
score: 26.4
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 14..79
e-value: 6.2E-8
score: 32.3
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 6..81
score: 13.424
NoneNo IPR availableGENE3D3.10.20.90coord: 2..89
e-value: 1.6E-9
score: 39.2
NoneNo IPR availablePANTHERPTHR14557:SF5coord: 15..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 127..146
IPR040352Transmembrane and ubiquitin-like domain-containing protein 1/2PANTHERPTHR14557PROTEIN C7ORF21coord: 15..165
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 5..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:621377..625733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.12022.1mRNA_P-fluviatile_contig56.12022.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 621359..628685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.12022.1 ID=prot_P-fluviatile_contig56.12022.1|Name=mRNA_P-fluviatile_contig56.12022.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=210bp
MLREGVSVRIRGHGERTLAVKFRDAETVADFKARVFGDEIAKGKKCRLIA
SGKELQDFQQMGFYRLQQDACLHVMINQRAAAAPAPAASATPPTSVPESA
STIGAQPPPGPGVRPAATRTVSEGREVAILCALTLAMVIAAWTARMTFPD
FFSSEATGLLLLLTSLQLAATLPLLKKALLAALGACSCWWRPSSGGGRAA
RAPGRRRQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR040352TMUB1/2
IPR029071Ubiquitin-like_domsf