prot_P-fluviatile_contig56.11984.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.11984.1
Unique Nameprot_P-fluviatile_contig56.11984.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length376
Homology
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BLAST of mRNA_P-fluviatile_contig56.11984.1 vs. uniprot
Match: D8LC19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC19_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 6.980e-66
Identity = 117/197 (59.39%), Postives = 143/197 (72.59%), Query Frame = 0 
Query:  111 VIALVGFLAVLPFNSTVSMLEVPLLTVDECKLVSEAAAEMIAGPGFMPAFTVYDHSTEVPLKDLPDEVFALVMQALDEKLMPFVAVEYGKNGEIIALDDRLYVEHYHAHHEPPPAAHLRPGQLSLRVELTPPESKYVGGGGVVLGSMGKSITPGTGNGLILPAKLKHGSTQPGPDSRSVLVGTLTVRGKDPWQRFVS 307
            ++ L G LAVLPFNSTV+MLEVPL T  EC  V+EA AE ++ PGF P   + D STEVP++DLP EV  +V +AL ++LMPFV +E+   G+++ LD+RLYVEHY A+HEPPP AH+R GQL+LRVEL PPESKYVGGGGV L SMGK+ITPG G+GL+LPAKL   S   G   RSV+VG L       W   VS
Sbjct:    1 MVILAGCLAVLPFNSTVTMLEVPLFTPAECLAVAEATAEAVSRPGFSPTSFLLDPSTEVPVQDLPAEVSTMVSEALRQRLMPFVGLEFSSQGQVV-LDERLYVEHYQAYHEPPPVAHVRQGQLALRVELDPPESKYVGGGGVRLESMGKTITPGMGSGLVLPAKL---SRLVGSACRSVIVGGLRYISHTAWLAVVS 193
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.11984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC19_ECTSI6.980e-6659.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..65
NoneNo IPR availableTMHMMTMhelixcoord: 78..95
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:290756..296764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.11984.1mRNA_P-fluviatile_contig56.11984.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 290591..297651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.11984.1 ID=prot_P-fluviatile_contig56.11984.1|Name=mRNA_P-fluviatile_contig56.11984.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=376bp
MGKKSRSPSSSHAPVPAPARTRPPAQETPPPSPKDQEAGWRRIRRSLIIL
LAIAALSLVDLLTLQDVFTVAIPDNKPLLALVTLFGWVVWKRWSGGDKQG
MHPIGRTVGFVIALVGFLAVLPFNSTVSMLEVPLLTVDECKLVSEAAAEM
IAGPGFMPAFTVYDHSTEVPLKDLPDEVFALVMQALDEKLMPFVAVEYGK
NGEIIALDDRLYVEHYHAHHEPPPAAHLRPGQLSLRVELTPPESKYVGGG
GVVLGSMGKSITPGTGNGLILPAKLKHGSTQPGPDSRSVLVGTLTVRGKD
PWQRFVSIWRLWGLFARSVRYSADKRLPTSAWDTIIPSPDDPIPEAIDEA
GIEVGLGDGEAGSGTRGGAGGKLEF*
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