prot_P-fluviatile_contig56.11977.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.11977.1
Unique Nameprot_P-fluviatile_contig56.11977.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length213
Homology
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: D8LIY3_ECTSI (Peroxisomal membrane protein PEX14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY3_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.170e-73
Identity = 135/216 (62.50%), Postives = 161/216 (74.54%), Query Frame = 0
Query:    5 LREDMVKRAVGFLRHPKVVGAPKDKQTQFLRDKQLTQPEIEEALKRVAQLEDEEASAKTRAALASAPTRRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFAAAG--------GGADNGLRFSVSVTAHL 212
            +R+DMVKRAV FLRHPKV GAP+ KQ  FL+DKQLT  EI EAL++ A+L   EASAKTRAAL +APT+RF KGS+RSEAV SGGIV+IS QTA  P+P +G  +G+   G   VAESLS EQQA  AL+ +K LL+E GSS SKV+SAL+CVRDLGQDL GV++AW  W+DK+NPPARTV+QT A    G        GG    +R SVSVTAHL
Sbjct:    4 IRQDMVKRAVSFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVAAPTKRFQKGSVRSEAVASGGIVFISGQTAL-PSPTAGDDSGE---GDVGVAESLSPEQQAARALDKIKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVIQTGAIVGGGVGGAKPRRGGESIDIRVSVSVTAHL 215          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: UPI00164471B0 (RidA family protein n=1 Tax=Pseudomonas vanderleydeniana TaxID=2745495 RepID=UPI00164471B0)

HSP 1 Score: 63.2 bits (152), Expect = 2.010e-9
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  124 SAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFAAAGGGADNGLRFSVSVTAHL 212
            SAEQQ    L+N++RLL +AG+  + +LSA + ++D+  D + ++R W  WV +   PAR  V+ + F       D G R  +S+ A L
Sbjct:   35 SAEQQTRETLDNIERLLDQAGTDKTHILSATIYLKDIATDFEAMNRVWDQWVPQGAAPARATVEAKLF-------DPGFRVEISIIAAL 116          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: A0A432V142_9HYPH (RidA family protein n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V142_9HYPH)

HSP 1 Score: 62.4 bits (150), Expect = 3.730e-9
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   73 RRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPAR 183
            +R    S RS AVV G +VY+            GG+ GD K     V        Q    L  + +LL+EAGSS SKV+SA + ++ +  D DG++  W  W+D +NPPAR
Sbjct:    5 KRIDANSRRSRAVVVGNMVYL------------GGQVGDSKQADIKV--------QTRETLAKIDQLLEEAGSSRSKVVSATIWLKSM-DDYDGMNEIWDAWIDADNPPAR 94          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: V5VHH4_ACIBA (Endoribonuclease L-PSP family protein n=105 Tax=Gammaproteobacteria TaxID=1236 RepID=V5VHH4_ACIBA)

HSP 1 Score: 62.0 bits (149), Expect = 5.320e-9
Identity = 35/110 (31.82%), Postives = 62/110 (56.36%), Query Frame = 0
Query:   83 EAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFA 192
            E  +SG +V+++ Q A            DD       +  ++A+ Q T  L+N+ RLL EAG+  S +LS ++ ++D+ +D   ++  W  W+ KE+PPART V+++ +A
Sbjct:   14 EVAISGNLVHLAGQLA------------DD------TSVDITAQTQQT--LDNIDRLLAEAGTDKSHILSVMIFLKDIDKDYAAMNTVWDAWISKEHPPARTCVESKLYA 103          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: UPI00166AC90D (RidA family protein n=1 Tax=Aureimonas endophytica TaxID=2027858 RepID=UPI00166AC90D)

HSP 1 Score: 61.6 bits (148), Expect = 7.070e-9
Identity = 42/114 (36.84%), Postives = 56/114 (49.12%), Query Frame = 0
Query:   73 RRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVV 186
            RR   G   S AV+ G  VY++            G+ GD  GG A         +Q   AL  V RLLQ AGSS SK+LSA + ++D+  D   ++  W  W+D  NPPAR  +
Sbjct:    4 RRIEPGKRMSGAVIHGDTVYLA------------GQVGDPDGGIA---------EQTASALAEVDRLLQAAGSSKSKILSAQIWLKDIA-DFGAMNTVWDAWIDPANPPARATM 95          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: A0A7S2WK68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK68_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.820e-9
Identity = 52/182 (28.57%), Postives = 86/182 (47.25%), Query Frame = 0
Query:    6 REDMVKRAVGFLRHPKVVGAPKDKQTQFLRDKQLTQPEIEEALKRVAQLEDEEASAKTRAALASAPTRRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQ 187
            R+D+V+RA  FL+ P+   AP +++ +FL+ K  TQ EI+EA+    ++E +EA  K   ++       F   ++R       G+V+ S    + P                    +   E Q    LE   RLL+E+ S+   +LSA + + D+  D    + AW  W+ K+  PART+ Q
Sbjct:   12 RKDVVERAARFLQDPRSKAAPLEQRVEFLKSKDCTQAEIDEAIALAKEMEAKEAREKMSKSIVRTEIGEFYAKTVRVP-----GLVFTSGLIPRDP--------------------TAPFEAQCQEVLEAADRLLKESLSAKDALLSATVTLLDIS-DAPSFNTAWKTWLGKDKLPARTMFQ 167          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: A0A8D3XYA4_9PSED (Endoribonuclease n=4 Tax=Pseudomonas balearica TaxID=74829 RepID=A0A8D3XYA4_9PSED)

HSP 1 Score: 61.6 bits (148), Expect = 8.690e-9
Identity = 42/122 (34.43%), Postives = 59/122 (48.36%), Query Frame = 0
Query:   71 PTRRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFA 192
            P RR    +  SEAV+  G VY+S Q A            DD  G           QQ    L ++ RLL E G+  +++LSAL+ +RD+  D  G++  W  WV   + PART V+ E +A
Sbjct:    2 PIRRLHTETRYSEAVIHSGTVYLSGQLA------------DDLSGDI--------RQQTRETLASIDRLLAEVGTDKTRLLSALIHLRDIDGDYAGMNEVWDAWVPAGSAPARTTVRAEMYA 103          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: UPI000B89187A (RidA family protein n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=UPI000B89187A)

HSP 1 Score: 61.6 bits (148), Expect = 8.880e-9
Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 0
Query:   73 RRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWV--DKENPPARTVVQTEAFAAAGGGADNGLRFSVSVTA 210
            RR    S  S+ V  GG+VY+  QTA+               GSAS    ++A  Q +  L  V+ LL EAGSSPS++LSA + +RD+ +D  G++  W GW+  +K   P RT V+          A  GLR  V++ A
Sbjct:    4 RRHHTNSRLSKVVRYGGLVYLCGQTAK---------------GSASATGDIAA--QTSEVLSRVEALLTEAGSSPSRLLSATVYLRDI-RDFSGMNAVWEGWLADNKAEAPVRTTVEAAL-------ATEGLRVEVTIVA 118          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: A0A0H3YUI3_PSEST (2-iminobutanoate/2-iminopropanoate deaminase n=53 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0H3YUI3_PSEST)

HSP 1 Score: 61.2 bits (147), Expect = 1.210e-8
Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 0
Query:   71 PTRRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFA 192
            P RR    +  SEAV+  G VY+S Q A          TGD +             QQ    L +++RLL EAG+S +++LSA + ++D+  D  G++  W  W+     PART VQ   +A
Sbjct:    2 PIRRLHTETRYSEAVIHNGAVYLSGQLADD-------LTGDIR-------------QQTRETLASIERLLDEAGTSKARLLSATIHLKDIAGDYAGMNEVWDAWLPSGTAPARTTVQALMYA 103          
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Match: A0A2N8RDV1_PSEST (RidA family protein n=5 Tax=Pseudomonas TaxID=286 RepID=A0A2N8RDV1_PSEST)

HSP 1 Score: 60.1 bits (144), Expect = 3.260e-8
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   71 PTRRFIKGSIRSEAVVSGGIVYISEQTAQSPAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKVLSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQ 187
            P RR    +  SEAV+  G VY+S Q A            DD      +A  + A+ + T  L +++RLL+EAGSS +++LSA + ++D+  D  G++  W  W+     PART VQ
Sbjct:    2 PIRRLHTETRYSEAVIHNGAVYLSGQLA------------DD------LAGDIRAQTRET--LSSIERLLEEAGSSKARLLSATIHLKDISTDYAGMNEIWDAWLTPGTAPARTTVQ 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.11977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIY3_ECTSI1.170e-7362.50Peroxisomal membrane protein PEX14 n=1 Tax=Ectocar... [more]
UPI00164471B02.010e-935.96RidA family protein n=1 Tax=Pseudomonas vanderleyd... [more]
A0A432V142_9HYPH3.730e-936.94RidA family protein n=1 Tax=Pseudaminobacter arsen... [more]
V5VHH4_ACIBA5.320e-931.82Endoribonuclease L-PSP family protein n=105 Tax=Ga... [more]
UPI00166AC90D7.070e-936.84RidA family protein n=1 Tax=Aureimonas endophytica... [more]
A0A7S2WK68_9STRA7.820e-928.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8D3XYA4_9PSED8.690e-934.43Endoribonuclease n=4 Tax=Pseudomonas balearica Tax... [more]
UPI000B89187A8.880e-935.71RidA family protein n=1 Tax=Cupriavidus sp. YR651 ... [more]
A0A0H3YUI3_PSEST1.210e-833.612-iminobutanoate/2-iminopropanoate deaminase n=53 ... [more]
A0A2N8RDV1_PSEST3.260e-835.04RidA family protein n=5 Tax=Pseudomonas TaxID=286 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 82..190
e-value: 3.4E-10
score: 40.0
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 71..212
e-value: 7.0E-21
score: 76.3
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 81..191
IPR006785Peroxisome membrane anchor protein Pex14p, N-terminalPFAMPF04695Pex14_Ncoord: 6..78
e-value: 4.6E-15
score: 56.6
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..61
e-value: 1.3E-17
score: 64.8
IPR025655Peroxisomal membrane protein 14PANTHERPTHR23058PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 3..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:240785..241854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.11977.1mRNA_P-fluviatile_contig56.11977.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 240753..242072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.11977.1 ID=prot_P-fluviatile_contig56.11977.1|Name=mRNA_P-fluviatile_contig56.11977.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=213bp
MAAALREDMVKRAVGFLRHPKVVGAPKDKQTQFLRDKQLTQPEIEEALKR
VAQLEDEEASAKTRAALASAPTRRFIKGSIRSEAVVSGGIVYISEQTAQS
PAPASGGRTGDDKGGSASVAESLSAEQQATVALENVKRLLQEAGSSPSKV
LSALLCVRDLGQDLDGVDRAWAGWVDKENPPARTVVQTEAFAAAGGGADN
GLRFSVSVTAHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006175YjgF/YER057c/UK114
IPR035959RutC-like_sf
IPR006785Pex14_N
IPR036388WH-like_DNA-bd_sf
IPR025655PEX14