prot_P-fluviatile_contig55.11941.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig55.11941.1
Unique Name	prot_P-fluviatile_contig55.11941.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	543

Homology

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: D7G6S0_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S0_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 4.030e-159
Identity = 322/506 (63.64%), Postives = 350/506 (69.17%), Query Frame = 0

Query:   38 QQYGQQQVRQAEGYGGPPPSPVVAGSYMRQEPSYVDETXXXXXXXIVPGAGTPIASTASGSGDAAGFMVSAGGATTMGAPLQSFYPASLYGVPTSVYPYQQPGTYPGAYXXXXXXXXAAAGAGGSTAAGSFF--GQGGAFARSTNPGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMGVGAPSPRMMGPGPGMPAGRMQQTPNYRQPLLPGHGSTLRHHQVQGVVEDNMPPPSPAADTTGSGGIAPGFTVSGGGEEDHRQG-------GEASTTEVGIDPGSSRSRAGG--KFGVRANDHPHLAYIYRGRDAATDESGSXXXXXXXXXXXGYPQSAVVGGGDGKVSISAAGVGDEKPQDQDSSGYRARDE--YLA-PVSSVGGRAATASPDPPKGVSVSRAPSSSPAAAANAVGAATMPHQHQSLEHAMQTKLSI 529
            QQYGQQ    A+GYGGPPPSPVVAGS+  +   YV+E        IV GAGTPIAST SG+G+   FMVS GGA  MGAP+QSFYP SLYGVPTSVYPYQQPG +    XXXXXXXX          AG  F  GQGG +ARSTNPGQPIQTTTNLQ GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKER+RY  V APSPRMMGPG  + AGRMQQT ++RQPLLPGH + LRHHQ                       +APGFT                   G+AS TEVGID G   +  GG  K+G R+NDHPHLAYIYRGR  A DE+G            GYP +   GG DGK +      GDEKPQDQDS GY  RD+  Y+A P SSVGG AA  SPDP KGVS  RA SSSP+AAANA     +PHQ  SLEHAMQTKL++
Sbjct:    3 QQYGQQXXXXADGYGGPPPSPVVAGSWGERT-GYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGT-FMVSTGGANAMGAPMQSFYPPSLYGVPTSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGGNFYAGQGG-YARSTNPGQPIQTTTNLQ-GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERY--VTAPSPRMMGPG--VAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXX----VAPGFTXXXXXXXXXXXXXXXXXXQGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTA-DETG------------GYPSAG--GGVDGKAA------GDEKPQDQDS-GYHGRDDSAYMAAPASSVGGSAA--SPDP-KGVS--RARSSSPSAAANAA----LPHQ--SLEHAMQTKLTM 463

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A6H5L5J0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J0_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 4.280e-114
Identity = 229/363 (63.09%), Postives = 248/363 (68.32%), Query Frame = 0

Query:  193 AGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMGVGAPSPRMMGPGPGMPAGRMQQTPNYRQPLLPGHGSTLRHHQVQGVVEDNMPPPSPAADTTGSGGIAPGFTVSGGGEEDHRQG--------GEASTTEVGIDPGSSRSRAGG--KFGVRANDHPHLAYIYRGRDAATDESGSXXXXXXXXXXXGYPQSAVVGGGDGKVSISAAGVGDEKPQDQDSSGYRARDE--YLA-PVSSVGGRAATASPDPPKGVSVSRAPSSSPAAAANAVGAATMPHQHQSLEHAMQTKLSIGGGTSPPSASQPS 542
            AGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKER+RY  V APSPRMMGPG  + AGRMQQT ++RQPLLP H + LRHHQ                       +APGFT                    G+AS T+VGID G   +  GG  K+G  +NDHPHLAYIYRGR  A DE+G            GYP +   GG DGK +      GDEKPQDQDS GY  RD+  Y+A P SSVGG AA  SPDP KGVS  RA SSSP AAANA     +PHQ  SLEHAMQTKL+IGG  SPPSA+QPS
Sbjct:   11 AGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERY--VTAPSPRMMGPG--VAAGRMQQTAHFRQPLLPAHNAGLRHHQGXXXXXXXXXXXXXXXXXX----VAPGFTXXXXXXXXXXXXXXXXXXXQGDASATDVGIDAGPRGASTGGGDKYGAHSNDHPHLAYIYRGRGTAADETG------------GYPSAG--GGVDGKAA------GDEKPQDQDS-GYHGRDDSAYMAAPTSSVGGSAA--SPDP-KGVS--RARSSSPGAAANAA----LPHQ--SLEHAMQTKLTIGGNGSPPSAAQPS 333

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A7S2V9D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9D2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.250e-37
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERD 280
            PG PIQTT  L  GP+GCNLFVFHIPN+MTN  L+ LF +FGNV+SARIMVEK TGRSRGFGF+SYDN  SA+ AI  MNG+QI HKRLKVQHKKDK  D
Sbjct:   41 PGAPIQTTP-LGQGPEGCNLFVFHIPNSMTNVDLYHLFLRFGNVVSARIMVEKHTGRSRGFGFISYDNAVSAKDAIKGMNGFQIGHKRLKVQHKKDKTWD 139

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)

HSP 1 Score: 142 bits (359), Expect = 2.720e-35
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMG 284
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q+  KRLKVQHKK+K +    G
Sbjct:  133 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGPMFG 235

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: G4ZPR3_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPR3_PHYSP)

HSP 1 Score: 142 bits (359), Expect = 3.020e-35
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMG 284
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q+  KRLKVQHKK+K +    G
Sbjct:  135 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKNQGPMFG 237

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A484DTS4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTS4_BRELC)

HSP 1 Score: 142 bits (358), Expect = 3.390e-35
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMG 284
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNG+Q+  KRLKVQHKK+K ++   G
Sbjct:  127 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKNQNPMFG 229

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A0P1AAZ2_PLAHL (Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAZ2_PLAHL)

HSP 1 Score: 142 bits (358), Expect = 3.570e-35
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMG 284
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNG+Q+  KRLKVQHKK+K ++   G
Sbjct:  133 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKNQNPMFG 235

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: H3GBP4_PHYRM (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GBP4_PHYRM)

HSP 1 Score: 142 bits (359), Expect = 3.610e-35
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMG 284
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q+  KRLKVQHKK+K +    G
Sbjct:  142 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGPMFG 244

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A8K1CK88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK88_PYTOL)

HSP 1 Score: 142 bits (357), Expect = 3.700e-35
Identity = 72/97 (74.23%), Postives = 80/97 (82.47%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 277
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F+ +GNVISARIMVEK TGRSRGFGFVSYDN  SAE+AI  MNG+Q+  KRLKVQHKK+K
Sbjct:  121 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYDNAASAEQAIKAMNGFQVGRKRLKVQHKKEK 216

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BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Match: A0A024URK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URK9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.900e-35
Identity = 73/97 (75.26%), Postives = 78/97 (80.41%), Query Frame = 0

Query:  181 PGQPIQTTTNLQAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 277
            PG PIQTT + Q GP GCNLFVFHIPN MTN+ LF  F  FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNGYQ+  KRLKVQHKK+K
Sbjct:  159 PGPPIQTTESGQ-GPPGCNLFVFHIPNDMTNQDLFNYFQSFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGYQVGRKRLKVQHKKEK 254

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig55.11941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S0_ECTSI	4.030e-159	63.64	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L5J0_9PHAE	4.280e-114	63.09	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A7S2V9D2_9STRA	1.250e-37	74.00	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
D0NCQ3_PHYIT	2.720e-35	71.15	CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phy...	[more]
G4ZPR3_PHYSP	3.020e-35	71.15	Uncharacterized protein n=3 Tax=Phytophthora TaxID...	[more]
A0A484DTS4_BRELC	3.390e-35	70.19	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A0P1AAZ2_PLAHL	3.570e-35	70.19	Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii...	[more]
H3GBP4_PHYRM	3.610e-35	71.15	Uncharacterized protein n=12 Tax=Phytophthora TaxI...	[more]
A0A8K1CK88_PYTOL	3.700e-35	74.23	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A024URK9_9STRA	3.900e-35	75.26	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 199..272 e-value: 5.1E-28 score: 109.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 200..270 e-value: 4.9E-22 score: 77.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 198..276 score: 19.382
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 176..282 e-value: 1.4E-29 score: 104.4
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 168..280
None	No IPR available	PANTHER	PTHR24012:SF686	CUGBP ELAV-LIKE FAMILY MEMBER 1	coord: 168..280
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 190..299

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig55	contig	P-fluviatile_contig55:753132..760967 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig55.11941.1	mRNA_P-fluviatile_contig55.11941.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig55 753132..763060 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig55.11941.1 ID=prot_P-fluviatile_contig55.11941.1|Name=mRNA_P-fluviatile_contig55.11941.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=543bp
MSYQQHQDGSRRGQQQQPSFPLQGINGATAARGSYAMQQYGQQQVRQAEG
YGGPPPSPVVAGSYMRQEPSYVDETYMRQDPSIVPGAGTPIASTASGSGD
AAGFMVSAGGATTMGAPLQSFYPASLYGVPTSVYPYQQPGTYPGAYGGGG
TGGGAAAGAGGSTAAGSFFGQGGAFARSTNPGQPIQTTTNLQAGPDGCNL
FVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRD
SAEKAISQMNGYQIEHKRLKVQHKKDKERDRYMGVGAPSPRMMGPGPGMP
AGRMQQTPNYRQPLLPGHGSTLRHHQVQGVVEDNMPPPSPAADTTGSGGI
APGFTVSGGGEEDHRQGGEASTTEVGIDPGSSRSRAGGKFGVRANDHPHL
AYIYRGRDAATDESGSGSGGIGGGGSGGYPQSAVVGGGDGKVSISAAGVG
DEKPQDQDSSGYRARDEYLAPVSSVGGRAATASPDPPKGVSVSRAPSSSP
AAAANAVGAATMPHQHQSLEHAMQTKLSIGGGTSPPSASQPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf