prot_P-fluviatile_contig55.11912.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11912.1
Unique Nameprot_P-fluviatile_contig55.11912.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1637
Homology
BLAST of mRNA_P-fluviatile_contig55.11912.1 vs. uniprot
Match: A0A6H5JST5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST5_9PHAE)

HSP 1 Score: 536 bits (1382), Expect = 4.800e-159
Identity = 617/1623 (38.02%), Postives = 728/1623 (44.86%), Query Frame = 0
Query:  129 GNAALEPDLDSALSAPRKKPRT-GAPA--------DPGGNE--NGMGGGVGSVASAG-RANRGHVEAATHAGPKDDWGGVTEGMFRKRVSEDLKSMLRECGGSCGMVEVAGAYKKHHNRLLDLQGKKLRVLLTTKGGLYGIRLRGTGQDAVIELKESAARKKHGPLAADPDTSGAGDRSGTLQLTRTVVNPDAVWNDHSSPR---------SLGSPDAF--GGSRRNTRSAAIALPPDARKSLSYVNRLADAEDAAGLRRRDVPPVAGHSRGEPFGNRHAGEANVRRGGDWRVRGGWSRSXXXXXXXXXXXXXXISRNRRDISSRDAGGRSGGNSGRGEGTAGAGGRSGRRFPSENRRFSHTARRRGSSPQGLRYSSPPQRRRTRSPSP--SPP--NRGE------RRLGDSRNRQ----RSHSRGSRRKSSPPRRASPAXXXXPLSNXXXXXXXXXXXXXXXXXXXXSRRXXXXXXXXXXXXXXXXXAERGGRDXXXRDRDRGETREEYARDGGARPAVAGRDRRERLSPAAPARAVEDKRRLESARHEVAAVSRGDGAARPYGYRGRPGDQAGAPPPRGYGNASPAANYAAAPVTYASDPVYGNPKVDRRGEEIGRSAHGGGGVAGRRAMDPIIPLARDGAPIPPEA-AVSGRPS-------------------------MVEGAAGGVGGLLSSNDSSRQQYHTAVGQ----GDYPAANGGMTRRDWAREDGGSGAPAGQMVGLDRSFLASPHPAPAMLPPPSSLRPIHLPAGRAQGARLMIKGTHPAVPERRIHALASAFGIVGKIEVLEGFVFVHMKSLEEASRAVAGLNGTVIPNVCPH--DPSGGGSAPLLASIWREEMYQALMSRENMRIYADSMRRASTWYEKQTKSGFVDVHGDRMPCRFFALGRGCIFGNNCGFSHEQLPQQRSRGAVKIHGGPDGGPSFASPPLSKRQPLLPSPSFEPGSDARGEGAPLPHRQERVPVLAYDGQSRPLNFVHREEAHRQPALGAHEGLGAQGGHKPAFDRSVDGVGVGVARPWQPEHGARAAAGPAAGFGQAVVSDRASLLHAGISDGRSVDHQQPRRGNVPSEALGSSEPRRDGPSR-----THVKDSDKARRGGXXXXXXX------------DADGAGGSRRXXXHNGGEGQSMRRMLHDRKRSRERGKGR---DVSSTSASRRDSRSRLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGGLKRSS--AGRGSIRDAGWRPGGGDSRNRGRERRDDATDRGSRRHRREDSSAQRQSPFSRSNSRXXXXRGDGGGDRREPSPARDKRAPGS--------------------RRGRDSVSPVMRGRRHGDTPSMSPRGKARGYDGEGVDYELDDRQLKRGRYERGNARGRGIDGGSQREESEDKPGSFAGRAGGRREGSRG-GHGWAPLAHDPGPFSPDSEGRSFGLSPR----DVSDGGF---HGGWLPDGVSRSRHGSPDWEDDHMSGGLMQPEGSPGPPATKFTITTRLDSM--PPPFAEDDXXXXXXXXXXXXXMPSDIATVLGPTAASGVRRTGLPPSRGRGRGRGGRFGNNMASRRPLRGSQYDDG 1630
            G+A  E DLD ALS     PR  G PA        +P GN    GM G   S    G    R  VEA      ++DWGG +EGMFRKRVSE+LK+MLR CGG C M  +A  +K+ H R+L+LQGKKLR LLTT  GLYGI L G GQD  I L+E +A K     AA    S  GDR  T  LTRT VN  A+ N  S  R         +   PD    GG+  ++RSA +   P      + V  +    DA G                P  +R  G+A V RG +W         XXXXXXXX         +R+D S R   G S                  R  PS  R+ S TA   G      R+S P QRRR R PS   S P  +RGE      RR   SR       RSHSR  RR  SP RR    XXXX    XXXXXX                                                     +     G  RPA A RDR + LS A  +R    +R LE  R E   +  GDG        GR G   GA   RG          +A+ V Y ++P+ G P+  R+G+E GRSA G G V G+  MDP+IPLA  G   PP A A  GRP                          +VEG  G  GG  S+ D  R+      G     G Y   NG     DW   DGG G+  G  VG  R F   PHPAPA+LPP  SLRP+     RAQGARLMIKGTHPAVPERRIHAL S FG+VGKIEVLEGFVFVHMKSLEEA+RAV GLNG V+P+V P   D +G    PL A+IWREE YQALMSRENMRIYADSMRRASTWYEKQTKSGF D  G  MPCRFF+LGRGCIFGNNCGFSHEQ P+   R A   H G  GGP FA+  L K   ++PS +  P   +R    P P  Q RV +LA+  QS  L FVHR+E HR+   GA E L      KP    +    GVGVA PWQPEH      G  +  GQ        L   G +  R+VD Q+  RG   S+A  S    R+G  R     T   + D  RR G                   D+ G    R     N G   S R     R   RE    R    VSS   SRRD+                                 X                SGG + +     R S R A  +PG G S +  RE  +    RGSR H  +  S  RQ   SRS +R    R                                         RR RD  SPV  G+                   E  D +LD R+ K+ R ER  +RGRG D         ++ G F+GR GG R GS    HGW+  A +PG FS D   RS+G +PR    +   GG     G ++ D  S S +GS  W D  +    M  E  P P  T+FT+T RL S+  PPP +                MPS+I   LGPT+ SG  R G  P+RGRGRG  G    + A RRP R  Q D+G
Sbjct:  163 GSAEGEGDLDDALSGALCAPRNVGNPAPGAAVASDEPAGNAFTEGMAGKEVSKPKVGITVGRVEVEAGRK---QEDWGGQSEGMFRKRVSEELKAMLRSCGGRCEMSSIAKLFKRRHKRVLNLQGKKLRALLTTGSGLYGIGLYGHGQDGEIRLEEKSAVKDSNSDAATGPNS-VGDRGSTQPLTRTFVNHSALRNQGSRSRGRSPWGRGGTCDEPDQGPPGGAGHSSRSAIVR--PTLDPLGNSVGSMRSRPDAVGA---------------PTRSRMDGDARVGRG-EWSRXXXXXXXXXXXXXXXSWDKGVSGGHRKDESLRPTHGAS------------------RSSPSV-RKSSRTA---GRLSPHERHS-PQQRRRGRIPSSRESSPRGSRGECRGTIPRRRSSSRRNSGKWHRSHSRSPRR--SPCRRGXXXXXXXXXXXXXXXXXSPPRRVGRHDSAKPGPTNRSCGDHLNVSF------------------------DPRGTHGSTRPA-ARRDR-DMLSHAVSSRKATRERSLE--RPEPDGMRPGDG--------GRQGGCIGASRRRGR---------SASLVGYVTEPLRGTPEEARKGQENGRSAVGRGAVGGQ-TMDPVIPLALGGTRAPPVAGAARGRPXXXXXXXXXXXXXXXXXXXXSSGTRCLVEGTVGSGGGFPSNFDLPRKLNDAGAGPTGSAGGYSEGNGRPMAGDWLIGDGGGGSQEG--VGQLRRF--PPHPAPALLPPHFSLRPLPPMLVRAQGARLMIKGTHPAVPERRIHALVSTFGVVGKIEVLEGFVFVHMKSLEEATRAVTGLNGEVVPHVSPQATDRAGAAPLPLAAAIWREEQYQALMSRENMRIYADSMRRASTWYEKQTKSGFNDTLGKAMPCRFFSLGRGCIFGNNCGFSHEQRPRH-PRAAASTHEGA-GGPGFAAR-LPKPPSVIPSRAVAPTLSSRTGVEPNPSGQGRVSLLAHHEQSPTLTFVHRDEMHRRSGPGAQEDL------KPDPTGAYTASGVGVAMPWQPEH----EVGVISAVGQV-------LPQPGATSDRNVDRQEHARGGTSSQAFPSPPALRNGAGRMRSPATPTTNLDNTRRSGYQYESHSHRANGRGGGGCRDSGGGDSKRDRGGRNSGGSSSWREEPLGRNSDREHNDSRRSSPVSSRGRSRRDA--------------------------SPISAHAXKRGRGSSSHRSSPPRGSGGFENNDERVSR-SSRKAVQQPGRGHSGSPRRESLESVPGRGSRGHHLDRRS--RQCRDSRSTNRPRSRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSRDCASPV--GKARXXXXXXXXXXXXXXXXSESGDSKLDGRRSKKSRNERETSRGRGSDRXXXXXXGGER-GMFSGRRGGGRRGSDDVSHGWSSPADNPGAFSRDDHSRSYGGAPRGDLYNAGSGGVPRREGRYVAD-CSSSPNGSAGW-DSMVKEEFM--EDPPRPVKTQFTVTARLGSLQQPPPVSAP-AGADNPSTRFSITMPSNITGALGPTSPSGGVRRGGRPARGRGRGGRGDIPRDAARRRPPRDVQDDEG 1631          
BLAST of mRNA_P-fluviatile_contig55.11912.1 vs. uniprot
Match: D7G6Q3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q3_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 4.200e-13
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  129 GNAALEPDLDSALSAPRKKPRT-GAPADPGGNENGMGGGVGSVASAGRANR-----------GHVEAATHAGPKDD-WGGVTEGMFRKRVSEDLKSMLRECGGSCGMVEVAGAYKKHHNRLLDLQGKKL 244
            G+A  E DLD ALS     PR  G P  P G     G   G  ++ G A +           G VE    AG K + WGG +EGMFRKRVSE+LK+MLR CGG C M  +A  +K+ H R ++LQGKK+
Sbjct:  139 GSAEGEGDLDDALSGALCAPRNVGNP--PPGAAVASGEPAGDASTEGMAGKDVLKPKVGITAGRVEV--EAGRKQEYWGGQSEGMFRKRVSEELKAMLRSCGGRCEMSSIAKLFKRRHKRAMNLQGKKV 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JST5_9PHAE4.800e-15938.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Q3_ECTSI4.200e-1344.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 844..902
e-value: 1.2E-4
score: 21.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 842..902
score: 9.405
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 836..905
e-value: 4.2E-7
score: 31.9
IPR041367E3 ligase, CCCH-type zinc fingerPFAMPF18044zf-CCCH_4coord: 966..987
e-value: 1.3E-5
score: 24.9
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 962..989
score: 12.399
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 966..994
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 834..903

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:419168..428519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11912.1mRNA_P-fluviatile_contig55.11912.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 419007..431287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11912.1 ID=prot_P-fluviatile_contig55.11912.1|Name=mRNA_P-fluviatile_contig55.11912.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1637bp
MDLKEEGCPSPIQTSDADLLSGPETAEDLVSGGPQSMRSASSVKTATSAK
SEASVVKPEASSTETTSTSGKPSAASPTMSLQGFVLSASPKGSEAGSGRG
TLKVFAAAAAAPSPILRQEEDNEEEEAAGNAALEPDLDSALSAPRKKPRT
GAPADPGGNENGMGGGVGSVASAGRANRGHVEAATHAGPKDDWGGVTEGM
FRKRVSEDLKSMLRECGGSCGMVEVAGAYKKHHNRLLDLQGKKLRVLLTT
KGGLYGIRLRGTGQDAVIELKESAARKKHGPLAADPDTSGAGDRSGTLQL
TRTVVNPDAVWNDHSSPRSLGSPDAFGGSRRNTRSAAIALPPDARKSLSY
VNRLADAEDAAGLRRRDVPPVAGHSRGEPFGNRHAGEANVRRGGDWRVRG
GWSRSRSRSRSQGRRRSRSISRNRRDISSRDAGGRSGGNSGRGEGTAGAG
GRSGRRFPSENRRFSHTARRRGSSPQGLRYSSPPQRRRTRSPSPSPPNRG
ERRLGDSRNRQRSHSRGSRRKSSPPRRASPARRNSPLSNSRRRGSSPKNS
RSPRESSPPSRRRRNSPPSRKSSPPRRQSAERGGRDRGSRDRDRGETREE
YARDGGARPAVAGRDRRERLSPAAPARAVEDKRRLESARHEVAAVSRGDG
AARPYGYRGRPGDQAGAPPPRGYGNASPAANYAAAPVTYASDPVYGNPKV
DRRGEEIGRSAHGGGGVAGRRAMDPIIPLARDGAPIPPEAAVSGRPSMVE
GAAGGVGGLLSSNDSSRQQYHTAVGQGDYPAANGGMTRRDWAREDGGSGA
PAGQMVGLDRSFLASPHPAPAMLPPPSSLRPIHLPAGRAQGARLMIKGTH
PAVPERRIHALASAFGIVGKIEVLEGFVFVHMKSLEEASRAVAGLNGTVI
PNVCPHDPSGGGSAPLLASIWREEMYQALMSRENMRIYADSMRRASTWYE
KQTKSGFVDVHGDRMPCRFFALGRGCIFGNNCGFSHEQLPQQRSRGAVKI
HGGPDGGPSFASPPLSKRQPLLPSPSFEPGSDARGEGAPLPHRQERVPVL
AYDGQSRPLNFVHREEAHRQPALGAHEGLGAQGGHKPAFDRSVDGVGVGV
ARPWQPEHGARAAAGPAAGFGQAVVSDRASLLHAGISDGRSVDHQQPRRG
NVPSEALGSSEPRRDGPSRTHVKDSDKARRGGGGGGGSGDADGAGGSRRG
GSHNGGEGQSMRRMLHDRKRSRERGKGRDVSSTSASRRDSRSRLGSANNG
SERQSSPRRSNQHRTGPRRSSPRRSNSRRTSPRRGSPRRTSGGLKRSSAG
RGSIRDAGWRPGGGDSRNRGRERRDDATDRGSRRHRREDSSAQRQSPFSR
SNSRRRRHRGDGGGDRREPSPARDKRAPGSRRGRDSVSPVMRGRRHGDTP
SMSPRGKARGYDGEGVDYELDDRQLKRGRYERGNARGRGIDGGSQREESE
DKPGSFAGRAGGRREGSRGGHGWAPLAHDPGPFSPDSEGRSFGLSPRDVS
DGGFHGGWLPDGVSRSRHGSPDWEDDHMSGGLMQPEGSPGPPATKFTITT
RLDSMPPPFAEDDDSPGRPATKFSITMPSDIATVLGPTAASGVRRTGLPP
SRGRGRGRGGRFGNNMASRRPLRGSQYDDGDSNNSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR041367Znf-CCCH_4
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf
IPR035979RBD_domain_sf