prot_P-fluviatile_contig55.11907.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11907.1
Unique Nameprot_P-fluviatile_contig55.11907.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length161
Homology
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BLAST of mRNA_P-fluviatile_contig55.11907.1 vs. uniprot
Match: D7FLT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 7.570e-39
Identity = 82/150 (54.67%), Postives = 100/150 (66.67%), Query Frame = 0 
Query:    1 MRFYAVLLAAVAAFALVCPC----LGRGETHVPRG----MKATVTAQEKDLARMRAYKVVAEEMGVRNPDELAMLARVEEVTDELLREKFPDAYEKKRRVRATYVSSDSDDVWENGTVVRYIARVLLFVLAVCGLMAWRDPIKADKPDST 142
            M+ Y +LLAA+ A ALVCP      GR  T   +G    M ATV+ ++K+LA+MRAYK   +EMG  + DELAML RVEE+TD+LLRE FPDAY+     R   V  DSDDVWENGTVVRY+ARV+  +LA  GL AW D    +KPD T
Sbjct:    1 MKSYTLLLAALIAIALVCPSCAKGFGRKRTMARQGDQEPMAATVSTRDKELAKMRAYKAAVQEMG-EDADELAMLKRVEEITDKLLRESFPDAYKPAPAKRPKAV--DSDDVWENGTVVRYLARVMALLLAAAGLYAWNDKDVREKPDRT 147
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT0_ECTSI7.570e-3954.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..130
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.825
NoneNo IPR availableTMHMMTMhelixcoord: 113..130
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:333846..337750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11907.1mRNA_P-fluviatile_contig55.11907.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 333816..338864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11907.1 ID=prot_P-fluviatile_contig55.11907.1|Name=mRNA_P-fluviatile_contig55.11907.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=161bp
MRFYAVLLAAVAAFALVCPCLGRGETHVPRGMKATVTAQEKDLARMRAYK
VVAEEMGVRNPDELAMLARVEEVTDELLREKFPDAYEKKRRVRATYVSSD
SDDVWENGTVVRYIARVLLFVLAVCGLMAWRDPIKADKPDSTKFIRGGPA
GTAAHTRKTK*
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