prot_P-fluviatile_contig55.11893.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11893.1
Unique Nameprot_P-fluviatile_contig55.11893.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length241
Homology
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BLAST of mRNA_P-fluviatile_contig55.11893.1 vs. uniprot
Match: D7FLU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU5_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.730e-25
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:   44 CTEDFVFIDSLITHLGNPIGGCYENSTTLQGGYPLYTLGGGPTARGQARIYVSEATLTWEIGVAEEVNTTTGAIASLLTVCTSLGV-----PADEVQVTDPALNGMWQC 147
            CTED VF+DSLIT+LG PIGGCY+ +TTL  G+P Y LGGG  A G A IYVS A  +WEIG  +EV+ +TG ++SL  VCTS G+     P  +   T   L+G WQC
Sbjct:   59 CTEDTVFVDSLITNLGYPIGGCYDMATTLLRGFPFYALGGGAAA-GDAWIYVSTAG-SWEIGTVDEVDDSTGGVSSLSAVCTSEGLLAADFPEGDNGPTSSQLDGAWQC 165
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLU5_ECTSI1.730e-2554.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.716
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:219367..223925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11893.1mRNA_P-fluviatile_contig55.11893.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 219340..223935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11893.1 ID=prot_P-fluviatile_contig55.11893.1|Name=mRNA_P-fluviatile_contig55.11893.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=241bp
MAKTTLSILSAAFLLSSSMAAAGQAATAGTRILQQQDDDGVAVCTEDFVF
IDSLITHLGNPIGGCYENSTTLQGGYPLYTLGGGPTARGQARIYVSEATL
TWEIGVAEEVNTTTGAIASLLTVCTSLGVPADEVQVTDPALNGMWQCTYF
QDGVTNYMADDFSGVDCGCDGRTVFDPNADTGGGGGFGSTAIAITALVII
AALAVIVIGCWCFVRRRNTKQAALEAAMEDEDHAVSASAS*
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