prot_P-fluviatile_contig54.11853.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11853.1
Unique Nameprot_P-fluviatile_contig54.11853.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length618
Homology
BLAST of mRNA_P-fluviatile_contig54.11853.1 vs. uniprot
Match: D7G0H0_ECTSI (F-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H0_ECTSI)

HSP 1 Score: 517 bits (1332), Expect = 1.270e-172
Identity = 331/637 (51.96%), Postives = 365/637 (57.30%), Query Frame = 0
Query:    1 MALWEGPFPGGFDCGGKAAHAALWLLAKGEAEQTRVAVYDPASPTRTATRRRVGY---TDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXASFPVHVSCMTISGGTIATATGPEITVWNLEEV-APRARFIVSGHGSVTCLLLRQGTLLAGDNSGYLRCYDVSAAGGS-PLHEIRTHAGRVTGIDAFSLPSGRTTGSXXXXXXXXXXXXXXXXXXAL-------------QTRCWDQGHGWGEGWLEASGEEG-GVDFPSPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLGSSRSSGVSLHSSSAGFGXXXXXXSRIGGFVGSSSS--SRLGKRQDYAGRGQGCEPMDAPATAGETGWGWWRG--RKGAEEKKEGQQGGKRV--EEEGGENEDAERLPWGGRAGRPAKSRGRGGVAGGTRAAASHTGAAATLLFTGSDDGTAKAWDAVSGRFVRVYAGHTRGVTCLQAAFTQSXXXXXXXXXXXXXXXXXXXXXXRCLEKLETGVGLATNPGGAGPRVGCLQAYRNSIVVGEDRHVSVWHLDRGKRPRLARARFCEHQRPIRRLELVGRWIVTCSGDYMIRLWDSKTGECVRELGTKSGAAIMSFRLSGVCLLSTSLFDATVLMTSFLPRR 612
            ++LWEGP PGGF  G KAAH ALWLLAKGE EQTRVAV +P+SPTRTA+RRRVG    T GG                           A FPVH+SCM I+G  IATA GPEITVW++E   APRARF VSGHGSVTCLLLR GTLLAGDNSGYLR YDVS  GG  PLHEIR HA RVT ID+F+LP G T  +                                 Q   WDQGH WGEGW E   E G G     P                                  G+G    +     +S+A  G       R     G +    SRLGKRQ YAGRGQ  EP  A    G    G  RG  R G         G      EE+GGE  D    P+ G+  RP    G+GG  G  R           LLFT SDDGTAKAWDA SGRFV +YAGHTRGVTCLQA  T+S                      RCLEKLETG GL  NPGG GPRVGCLQAYR++IVVGEDRHVSVW L +G+RPRLARARFCEHQRPIRRL++VG WIVTCSGDY+IRLWDS+TG CVREL TKSGAAI SFRLSG+CLL+TSLFD +VLMTSF  RR
Sbjct:  103 VSLWEGPLPGGFLRGEKAAHVALWLLAKGEVEQTRVAVSEPSSPTRTASRRRVGEATATGGGRDQGHGGARGEEGPAGGGAVAVA----AGFPVHISCMAINGAVIATAAGPEITVWDMEGASAPRARFKVSGHGSVTCLLLRSGTLLAGDNSGYLRSYDVSVPGGGRPLHEIRAHADRVTAIDSFTLPVGNTAAADSPVAEQPGGGSGGCYRSPAAEGEGGAWGRGGGQRGRWDQGHXWGEGWQEEESESGEGAQPLLPQRHLYGNSGASSYSPPPHASWGAAGEGAGSRQQHGIGGGTGALGESPASAADLGVEFNRLRRGSSHGGGTGEPLSRLGKRQGYAGRGQAYEPAGAAVGGGTRMQGRGRGIDRAGWAFDDGNNHGAPNAWSEEKGGEEND----PFVGQ--RP--DDGKGGAGGEQRE---------VLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLDMVGPWIVTCSGDYVIRLWDSRTGLCVRELETKSGAAITSFRLSGLCLLTTSLFDTSVLMTSFSQRR 718          
BLAST of mRNA_P-fluviatile_contig54.11853.1 vs. uniprot
Match: A0A835YXW5_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.880e-11
Identity = 72/266 (27.07%), Postives = 109/266 (40.98%), Query Frame = 0
Query:  415 FTGSDDGT-----------AKAWDAVSGRFVRVYAGHTRGVTCLQAAFT-----------------QSXXXXXXXXXXXXXXXXXXXXXXRCLEKLETGVGLATNPGGAGPRVGCLQAYRNSIVVGEDRHVSVWHL----DRGKRPRLARA-----RFCEHQRPIRRLEL-------VGRWIVTCSGDY--------------------MIRLWDSKTGECVRELGTKSGAAIMSFRLSGVCLLSTSLFDATVLMTSFLPRR--PP 614
            F G DDG            A+A  A+ G+ ++VYAGH++ V+CLQA+ +                                          CL+ L           G    V C+Q   +++VVG DR ++ W L       ++  L+ A     ++C       +L +       VG   +  + D+                    ++R+WD ++G CVRE+  +SGAAI+SFRLSG  L S SLF+ +VL T F P R  PP
Sbjct:  133 FAGCDDGVIRLIIISPRCIAQALGAMDGQLLQVYAGHSKAVSCLQASHSGGXXXXXXXXXXXXXAEPGAGTLLVSGSCDGTVRVWDCSSGTCLDVLRQEPCEEYMHDGLSQSVRCMQVCGSTVVVGADRSIAQWRLGSYGSAAEKAGLSAAAVCLRKYCSFMHGRAQLCVWQLGSASVGNGALAPTHDWFRSRAHSCAPARVRRAHRALLVRVWDVRSGRCVREVVGRSGAAILSFRLSGTTLFSCSLFEQSVLATHFCPERAAPP 398          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0H0_ECTSI1.270e-17251.96F-box domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YXW5_9STRA1.880e-1127.07Quinon protein alcohol dehydrogenase-like superfam... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 459..473
score: 32.14
coord: 552..566
score: 31.41
coord: 414..428
score: 38.64
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 430..472
e-value: 9.6E-4
score: 28.4
coord: 384..427
e-value: 24.0
score: 8.3
coord: 120..156
e-value: 42.0
score: 6.7
coord: 528..565
e-value: 1.0
score: 17.0
coord: 568..607
e-value: 430.0
score: 0.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 432..471
e-value: 9.8E-4
score: 19.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 413..436
score: 8.771
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 437..481
score: 11.077
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 549..574
score: 8.904
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 506..608
e-value: 1.2E-13
score: 52.4
coord: 31..198
e-value: 2.7E-9
score: 38.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 386..502
e-value: 6.7E-18
score: 66.5
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 412..533
coord: 507..603
NoneNo IPR availablePANTHERPTHR44156:SF8SUPERNUMERARY LIMBS, ISOFORM Bcoord: 412..533
coord: 507..603
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 552..566
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 414..428
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 459..473
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 413..574
score: 18.774
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 89..590

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:1024950..1031099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11853.1mRNA_P-fluviatile_contig54.11853.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 1022694..1035987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11853.1 ID=prot_P-fluviatile_contig54.11853.1|Name=mRNA_P-fluviatile_contig54.11853.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=618bp
MALWEGPFPGGFDCGGKAAHAALWLLAKGEAEQTRVAVYDPASPTRTATR
RRVGYTDGGGGGRGGGEGPAVGGGGGMGRGLGVAVAASFPVHVSCMTISG
GTIATATGPEITVWNLEEVAPRARFIVSGHGSVTCLLLRQGTLLAGDNSG
YLRCYDVSAAGGSPLHEIRTHAGRVTGIDAFSLPSGRTTGSGSGAGCSGG
GGGGGGGSGALQTRCWDQGHGWGEGWLEASGEEGGVDFPSPLAVAAAVAA
AGGRGREVGAPVGVGRGCGRGHGQQGLGSSRSSGVSLHSSSAGFGNGGGN
GSRIGGFVGSSSSSRLGKRQDYAGRGQGCEPMDAPATAGETGWGWWRGRK
GAEEKKEGQQGGKRVEEEGGENEDAERLPWGGRAGRPAKSRGRGGVAGGT
RAAASHTGAAATLLFTGSDDGTAKAWDAVSGRFVRVYAGHTRGVTCLQAA
FTQSYGPILVTGGGDSAVVIWELATGRCLEKLETGVGLATNPGGAGPRVG
CLQAYRNSIVVGEDRHVSVWHLDRGKRPRLARARFCEHQRPIRRLELVGR
WIVTCSGDYMIRLWDSKTGECVRELGTKSGAAIMSFRLSGVCLLSTSLFD
ATVLMTSFLPRRPPLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam