prot_P-fluviatile_contig54.11832.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11832.1
Unique Nameprot_P-fluviatile_contig54.11832.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1023
Homology
BLAST of mRNA_P-fluviatile_contig54.11832.1 vs. uniprot
Match: A0A6H5KR02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR02_9PHAE)

HSP 1 Score: 727 bits (1877), Expect = 1.460e-245
Identity = 464/931 (49.84%), Postives = 570/931 (61.22%), Query Frame = 0
Query:   88 TNKGVIPPWSCSSAFAEFGGF-------GSSNGGHHKSGWTCRRHMCGVSSTSPNVGVGDDDE------------------GGGRKSAASKVVELGKEVDFGGTERSKGLDTSGSGGRGFRGGGSGEPGQEAGTVAKQNKSRQKPQAKDRRPARPRQKKGHPFGKPLSLLAAEAXXXXXXXXXXGQGGPFFWPFDGGGCGGVDAEDELPDPELIEVEREGEGQDAADADDPRARVSAARPEVVHALSRGLAEGRSRLVADNLCSYATSSRTTESTLAQLERLLARRPHQVEWVMPLVRAHLTDETKPSAETHREHLSYVRDFNTKQVSHEDMAETLLHTFARHRWGPDMTREKLRTEHPERWEEAISLSEKLADRLPVCRHELLWRTLRKFLEAEQSGRRQRILAELSTVLRSSAHLVLPAIAKFWRLEI--TSMKLQEDVEAAKEKYRENRAVLARWLLFARRKSL-DAIAKFNGPWSLEELQEQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRPTLDTAAMNVISQALPPQVPPPKPAVPLGLFELHVVENPRALYLPPPRDIFGGDTPAGIGEAGSSEVPDYLAGDKDVKWE---RAGEAYAWPEE--READGE-EGWWEGAGRKELSRARAKDYQDVEDVLLTGKRRQRRPDDEHQDLAKDPDAIAVKKQLLERSALVADLHPDQTRQVELQLQDEGGRTVLIRGLPYGVSPWTVKEAFSRCGPVHQVMIREPTFREAEDARLAPRTPGGRSKPKPHSKPKRAFAIKPHSDIAYSTPHGLVVFKDEEGFQRATTDSFRIFGVSIEGAAVTTMPAHMCRTLYVENFQMRKGGDMVDAINAVLQPHFTVGPKSLFLDNEMPQVVAITLRNYATVRAVDDLLTAAGFYTTFQYTVPKVR 984
            T     P W+ +SA   FGG        GS  GG   SGW  RR    V++T+ N G G D E                  G GR  A S V E           RS  + T G+GG         E  QEA    K  K RQ  Q K            +PFGKPLS+LA+ +          G G   F+          D EDELPD  ++EV   G  + A    + R R++A  PEVV ALSRGLAEGR+RLVADNLC+YA++ RT ESTLAQLERLL RRP QVEW MPL+RAHLTDE++PS ETHRE LS+VR+ N K+V  EDMAE++L  +ARH+W PDMTREKLR EHPERW EA++LSEKLADRLPVCR++L+WRTL KFLEAE++ RR R+L EL+TVLR+  HLVLPAIA FWR+++  +S  ++E V+AAK+ + E++ +LARWL+ ARRK+L +   +F GPWS+EE QE  E                                                         R  L+TAA+ VIS+ALPPQVP  K   P+GL+EL VVE P  L +PPP DIFGGDTPAGIG+AG+ EVP  L+G  D  W    R  E  AWPEE   E DGE + W EGAG ++L RAR KDYQ+VEDVLL G R +R PDD  ++ A        K+QLL R+ALVA+LHPD  RQ+ELQ+++EG RTV +R LPYG+S +TV++AFSRCG VHQV+I+EP FRE ED       P  R    P++  KRAF     S++A+ST HGLVVF D EGF RAT +SFRIFGV I+GAAV T PAH CRTL+VEN +MR G +MV+AIN VLQP + VG  S  L+N +PQVVAI LR Y  VRAVD +LT AGF T + Y  P+VR
Sbjct:   44 TRHEATPGWTMASA--HFGGGVDLSGVGGSGCGGSSNSGWRNRRTFF-VATTAGNDGAGQDGEAAAAAETXXXXXXXTGGAGPGRAEATSVVGE-----------RSDKISTRGAGG---------EEHQEAKPPKKPRKRRQAAQTK------------YPFGKPLSVLASASTGF-------GAGSDAFF----------DIEDELPDLSVVEVAGHGHERAAMGTKELRERMAAC-PEVVVALSRGLAEGRARLVADNLCAYASTKRTAESTLAQLERLLGRRPDQVEWAMPLIRAHLTDESRPSWETHREQLSWVREMNIKEVGLEDMAESMLRAYARHQWDPDMTREKLRNEHPERWREAMTLSEKLADRLPVCRYQLVWRTLCKFLEAEKTRRRHRVLGELATVLRTWTHLVLPAIANFWRVDLYQSSKGMEERVDAAKDAFLEDQLLLARWLMLARRKALPEDDEEFKGPWSIEEAQEMQEARTREQEREGKEEDGDEEDYVYPDFDDEGDEDLIRGYSMDDAGWSVEESRDS---EHRQKLNTAAIKVISRALPPQVPKSKSPAPIGLYELSVVERPPELDVPPPPDIFGGDTPAGIGKAGAGEVP-ALSGAADRTWRGKRRLSEESAWPEEGQEEGDGEGKPWGEGAGEEKLPRAREKDYQEVEDVLLKGMRVRRPPDDMEEEQA----TRERKEQLLRRAALVAELHPDTARQIELQMEEEGSRTVFVRRLPYGLSAYTVRDAFSRCGDVHQVIIKEPIFREGED-------PVSR----PNAGRKRAFRPSGQSELAFSTAHGLVVFSDHEGFDRATGESFRIFGVHIKGAAVATSPAHQCRTLFVENLEMRTGLEMVEAINEVLQPRYKVGLASQSLENNVPQVVAIPLRKYVAVRAVDKILTDAGFITAYHYIKPQVR 902          
BLAST of mRNA_P-fluviatile_contig54.11832.1 vs. uniprot
Match: D7FT58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT58_ECTSI)

HSP 1 Score: 503 bits (1296), Expect = 9.610e-164
Identity = 296/600 (49.33%), Postives = 368/600 (61.33%), Query Frame = 0
Query:  394 MAETLLHTFARHRWGPDMTREKLRTEHPERWEEAISLSEKLADRLPVCRHELLWRTLRKFLEAEQSGRRQRILAELSTVLRSSAHLVLPAIAKFWRLEI--TSMKLQEDVEAAKEKYRENRAVLARWLLFARRKSL-DAIAKFNGPWSLEELQEQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRPTLDTAAMNVISQALPPQVPPPKPAVPLGLFELHVVENPRALYLPPPRDIFGGDTPAGIGEAGSSEVPDYLAGDKDVKWE---RAGEAYAWPEEREADG---EEGWWEGAGRKELSRARAKDYQDVEDVLLTGKRRQRRPDDEHQDLAKDPDAIAVKKQLLERSALVADLHPDQTRQVELQLQDEGGRTVLIRGLPYGVSPWTVKEAFSRCGPVHQVMIREPTFREAEDARLAPRTPGGRSKPKPHSKPKRAFAIKPHSDIAYSTPHGLVVFKDEEGFQRATTDSFRIFGVSIEGAAVTTMPAHMCRTLYVENFQMRKGGDMVDAINAVLQPHFTVGPKSLFLDNEMPQVVAITLRNYATVRAVDDLLTAAGFYTTFQYTVPKVR 984
            MAE++L  +ARH+WGPDMTREKLR EHPERWEEA++L+EKLADRLPVCR++L+W TL KFLEAE++ RR R+L EL+TVLR+  HLVLPAIA FWR+++  +S  ++E V+AAK+ + E++ +LARWL+ ARRK+L +   +F GPWS+EE QE  E                                                         R  L+TAA+ VIS+ALPPQVP PK   PLGL+EL VVE P  L +PPP DIFGGDTPAGIG+AG+ EVP  ++G  D  W    R  E  AWPEE + +G    + WWEGAG +EL RAR KDYQ+VEDVLL G R +R PD                                                V +R LPYG+S +TV++AFSRCG VHQV+I+EP FRE ED       P  R    P++  +R F     S++A+ST HGLVVF D +GF RAT +SFRIFGV IEGAAV T PA+ CRTL+VEN +MR G +MV+AIN VLQP + VG  S  L+N +PQVVAI LR Y  VRAVD +LT AGF T + Y VPKVR
Sbjct:    1 MAESMLRAYARHQWGPDMTREKLRNEHPERWEEAMTLAEKLADRLPVCRYQLVWGTLCKFLEAEKTRRRHRVLGELATVLRTRTHLVLPAIANFWRVDLYQSSKGMEERVDAAKDGFLEDQLLLARWLMLARRKALPEDDEEFKGPWSIEEAQEMQEARTREQEREGKEDDGDEEDYVYPDFDDEGDEDLIRGYSMDDAGWSVKESRDS---EHRQKLNTAAIKVISRALPPQVPKPKSPAPLGLYELSVVERPPELDVPPPADIFGGDTPAGIGKAGAGEVP-VMSGAADRTWRGKRRLSEESAWPEEGQEEGGGENKPWWEGAGEEELPRAREKDYQEVEDVLLKGMRVKRPPD----------------------------------------------AKVFVRRLPYGLSAYTVRDAFSRCGAVHQVIIKEPIFREGED-------PVSR----PNAGRRRGFRPSGQSELAFSTAHGLVVFSDHDGFDRATAESFRIFGVHIEGAAVATSPAYQCRTLFVENLEMRTGLEMVEAINEVLQPRYKVGLASQSLENNVPQVVAIPLRKYVAVRAVDKILTDAGFITAYHYIVPKVR 539          
BLAST of mRNA_P-fluviatile_contig54.11832.1 vs. uniprot
Match: D7FT59_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT59_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.190e-20
Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 0
Query:  299 AARPEVVHALSRGLAEGRSRLVADNLCSYATSSRTTESTLAQLERLLARRPHQVEWVMPLV 359
            AA PEVV ALSRGLAEGR+RLVADNLC YA++ RT ESTLAQLERLL RRP QVEW MPL+
Sbjct:   11 AACPEVVVALSRGLAEGRARLVADNLCVYASTKRTAESTLAQLERLLGRRPDQVEWAMPLI 71          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KR02_9PHAE1.460e-24549.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT58_ECTSI9.610e-16449.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT59_ECTSI7.190e-2080.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 695..894
e-value: 1.6E-5
score: 26.9
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 785..881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:868034..889986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11832.1mRNA_P-fluviatile_contig54.11832.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 866815..890368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11832.1 ID=prot_P-fluviatile_contig54.11832.1|Name=mRNA_P-fluviatile_contig54.11832.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1023bp
MLPAALARRESWRQSGRRAVTLPRIKATGLGSGAVAIRPATCTGSTTTPA
AAFCARATAAAAAAAARRGQPWPSPPLRRMVVVEPPLTNKGVIPPWSCSS
AFAEFGGFGSSNGGHHKSGWTCRRHMCGVSSTSPNVGVGDDDEGGGRKSA
ASKVVELGKEVDFGGTERSKGLDTSGSGGRGFRGGGSGEPGQEAGTVAKQ
NKSRQKPQAKDRRPARPRQKKGHPFGKPLSLLAAEAAAAAAASASAGQGG
PFFWPFDGGGCGGVDAEDELPDPELIEVEREGEGQDAADADDPRARVSAA
RPEVVHALSRGLAEGRSRLVADNLCSYATSSRTTESTLAQLERLLARRPH
QVEWVMPLVRAHLTDETKPSAETHREHLSYVRDFNTKQVSHEDMAETLLH
TFARHRWGPDMTREKLRTEHPERWEEAISLSEKLADRLPVCRHELLWRTL
RKFLEAEQSGRRQRILAELSTVLRSSAHLVLPAIAKFWRLEITSMKLQED
VEAAKEKYRENRAVLARWLLFARRKSLDAIAKFNGPWSLEELQEQAEARD
RERELEWEERRGRLHSGADDDDGDEVDEEDGFYSGDGVGVVGGGGEGEGR
RNRRRPTLDTAAMNVISQALPPQVPPPKPAVPLGLFELHVVENPRALYLP
PPRDIFGGDTPAGIGEAGSSEVPDYLAGDKDVKWERAGEAYAWPEEREAD
GEEGWWEGAGRKELSRARAKDYQDVEDVLLTGKRRQRRPDDEHQDLAKDP
DAIAVKKQLLERSALVADLHPDQTRQVELQLQDEGGRTVLIRGLPYGVSP
WTVKEAFSRCGPVHQVMIREPTFREAEDARLAPRTPGGRSKPKPHSKPKR
AFAIKPHSDIAYSTPHGLVVFKDEEGFQRATTDSFRIFGVSIEGAAVTTM
PAHMCRTLYVENFQMRKGGDMVDAINAVLQPHFTVGPKSLFLDNEMPQVV
AITLRNYATVRAVDDLLTAAGFYTTFQYTVPKVRIFPREAHGHQSNNVDE
ARDWKPAAAAAAVGSGATSEDM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf