prot_P-fluviatile_contig54.11816.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11816.1
Unique Nameprot_P-fluviatile_contig54.11816.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length171
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig54.11816.1 vs. uniprot
Match: D7G8D6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D6_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 4.740e-81
Identity = 128/173 (73.99%), Postives = 139/173 (80.35%), Query Frame = 0 
Query:    1 MPEPRVPKFRVPAAFVSPASLFLVGGIVYYFSLDKPTEDELNNNINKEFPDVVRGRKEVDDRMREFFRRVNNNDPREEERMRELLNKGKGSHYSAKRLHATTKDIEEFGFVPKTIDDESGAPASGKPPQAIT-IAPLTENKRPPGSGTKTLPPKEAAAEEESRP--RRWWRLW 170
            MPEPRVP+FRVPAA VSPASLFLVGGIVYYFSLDKP+EDELN+NI KEFPDVVRGR EVDDRM+EFF+RVNNNDPREEERMR+LLNKGKGSHYSAKR HATTKDIEEFGF+ K     S   A          IAPL ENKRPPG G+KT+P ++ A EEE     RRWWR W
Sbjct:    1 MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFISKPAGTSSSQTAPXXXXXXXXXIAPLAENKRPPGWGSKTIPSQKPAVEEEGGTPRRRWWRFW 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8D6_ECTSI4.740e-8173.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 11..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:674914..676033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11816.1mRNA_P-fluviatile_contig54.11816.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 674396..676089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11816.1 ID=prot_P-fluviatile_contig54.11816.1|Name=mRNA_P-fluviatile_contig54.11816.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=171bp
MPEPRVPKFRVPAAFVSPASLFLVGGIVYYFSLDKPTEDELNNNINKEFP
DVVRGRKEVDDRMREFFRRVNNNDPREEERMRELLNKGKGSHYSAKRLHA
TTKDIEEFGFVPKTIDDESGAPASGKPPQAITIAPLTENKRPPGSGTKTL
PPKEAAAEEESRPRRWWRLW*
back to top