prot_P-fluviatile_contig54.11807.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11807.1
Unique Nameprot_P-fluviatile_contig54.11807.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length177
Homology
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BLAST of mRNA_P-fluviatile_contig54.11807.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 8.280e-32
Identity = 82/146 (56.16%), Postives = 97/146 (66.44%), Query Frame = 0 
Query:    1 MDEVLRDALSSDNTVRKRAEATLSFLRAQRGFPLALAKRLSES-------GGDAATAVAAAGAVGE-------LSSLAGLLLQHFVSDLWEVADNAVLPQEDKSQVRRLVLSTMIDLGATRSARASASRVVALMA-ARGEWPVGWG 131
            MD VL  ALS+DNTVR+ AEA LS+ R QRGF +ALAK+L+ +        GD            E       +  +AG+LLQHFV D WE+AD+AVLP EDK QVR L L+TMID+ A R+ARASASRVVALMA A GEWP GWG
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNYYPRGAYDGDXXXXXXXXXXXXERDGMWMPMRLMAGMLLQHFVRDQWELADDAVLPAEDKIQVRTLALTTMIDVSAPRAARASASRVVALMATAGGEWPSGWG 146
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BLAST of mRNA_P-fluviatile_contig54.11807.1 vs. uniprot
Match: A0A6H5L9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Z1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.530e-18
Identity = 55/105 (52.38%), Postives = 67/105 (63.81%), Query Frame = 0 
Query:    1 MDEVLRDALSSDNTVRKRAEATLSFLRAQRGFPLALAKRLSESG-------GDAATAVAAAGAVGE-------LSSLAGLLLQHFVSDLWEVADNAVLPQEDKSQ 91
            MD VL  ALS+DNTVR+ AEA LS+ R QRGF +ALAK+L+ +        GD   A AA  A  E       +  +AG+LLQHFV D WE+AD+AVLP EDK Q
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNYHPRGAYVGDGNMARAAPAAERERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8B3_ECTSI8.280e-3256.16Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5L9Z1_9PHAE2.530e-1852.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..132
e-value: 3.9E-13
score: 50.3
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 19..102
score: 10.436
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:536170..541071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11807.1mRNA_P-fluviatile_contig54.11807.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 536170..541336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11807.1 ID=prot_P-fluviatile_contig54.11807.1|Name=mRNA_P-fluviatile_contig54.11807.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=177bp
MDEVLRDALSSDNTVRKRAEATLSFLRAQRGFPLALAKRLSESGGDAATA
VAAAGAVGELSSLAGLLLQHFVSDLWEVADNAVLPQEDKSQVRRLVLSTM
IDLGATRSARASASRVVALMAARGEWPVGWGADPRPPGTGGCCRRRGGAR
ERRRRRKGNRRRRRRHGGGGRSGGGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR001494Importin-beta_N
IPR016024ARM-type_fold