prot_P-fluviatile_contig54.11798.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig54.11798.1
Unique Name	prot_P-fluviatile_contig54.11798.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	107

Homology

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5L2N3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N3_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.160e-68
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 121

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 7.750e-68
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 121

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.230e-64
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0

Query:    3 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            R   DPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   32 RVNQDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 136

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 8.810e-64
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 121

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5KQE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE4_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.830e-62
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 121

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 5.950e-62
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKG
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKG 121

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 5.330e-60
Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGR RVDPEQAQKAVDAVRSGEMSLRVAA+TYGLPLASLHDRVK KVAIDA+VGPGTVLSKE EDFVEDVLIYASRHFLLLGRREL+DAVRN+CSDGRKVPW+PDKG
Sbjct:   53 MGRKRVDPEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFLLLGRRELKDAVRNICSDGRKVPWNPDKG 159

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5K7B5_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 3.490e-58
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSD--GRKVP 101
            MGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+D  G + P
Sbjct:   15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDQTGARCP 117

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5K5E3_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E3_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.480e-54
Identity = 90/105 (85.71%), Postives = 96/105 (91.43%), Query Frame = 0

Query:    3 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            R RVDPEQAQK VDAVRSG+MSLRVAA+TY LPLASLHDRVK +VAIDA VGPGTVLSKEEE FVEDVLIYASRHFLL GRREL+ AVRN+CSDGRKVPW+P KG
Sbjct:   70 RPRVDPEQAQKTVDAVRSGQMSLRVAAKTYRLPLASLHDRVKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKG 174

[Close]

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.300e-52
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0

Query:    1 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKG 107
            MGRTRVDPEQAQKAVDAVRSG+MS+R AA  YGL   SLH R+ NKVAIDA+V PGTVLSKEEE+FVEDVL+YASR  LLLGRREL+DAVR +C DGRKV WDPDKG
Sbjct:   15 MGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKG 121

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig54.11798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2N3_9PHAE	1.160e-68	97.20	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5JMR3_9PHAE	7.750e-68	97.20	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5LAK0_9PHAE	2.230e-64	95.24	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5JH77_9PHAE	8.810e-64	97.20	S5A_REDUCTASE domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KQE4_9PHAE	1.830e-62	97.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1T0_9PHAE	5.950e-62	97.20	Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUK8_9PHAE	5.330e-60	92.52	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K7B5_9PHAE	3.490e-58	92.23	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5K5E3_9PHAE	3.480e-54	85.71	HTH psq-type domain-containing protein n=1 Tax=Ect...	[more]
A0A6H5JPC4_9PHAE	1.300e-52	79.44	HTH psq-type domain-containing protein n=1 Tax=Ect...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007889	DNA binding HTH domain, Psq-type	PFAM	PF05225	HTH_psq	coord: 8..45 e-value: 3.6E-9 score: 36.2
None	No IPR available	GENE3D	1.10.10.60		coord: 7..48 e-value: 2.1E-8 score: 35.5
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 6..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig54	contig	P-fluviatile_contig54:492377..492697 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig54.11798.1	mRNA_P-fluviatile_contig54.11798.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig54 492361..492697 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig54.11798.1 ID=prot_P-fluviatile_contig54.11798.1|Name=mRNA_P-fluviatile_contig54.11798.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp
MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAID
ARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKV
PWDPDKG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007889	HTH_Psq
IPR009057	Homeobox-like_sf