prot_P-fluviatile_contig54.11771.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11771.1
Unique Nameprot_P-fluviatile_contig54.11771.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length218
Homology
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: D7FUR2_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUR2_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 6.100e-129
Identity = 177/217 (81.57%), Postives = 196/217 (90.32%), Query Frame = 0
Query:    1 MMATPEKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPAWVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYFNPL 217
            M ATPE+S++IPIDPYPEGLDGEMVGD GFDPAGFANNPP+WVQGEGTGTAARVKWYREAELAH RVAMLAAAGW+FPEIYH PGNTVLG DRFAEMNPLLA+DNIP +G IQI +T+ ILE+IRLNR+IR+  GV GDIGLGQGEGRWNPF FNYTEE+Y EKQLQE+K+GR AMI ITGMYFQTLVQG+ IL QL EAFS  D+V+KAGY+FNPL
Sbjct:   40 MAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNTVLGPDRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEEYAEKQLQEIKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNPL 256          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: W7TTD7_9STRA (Light-harvesting protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTD7_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.650e-77
Identity = 123/215 (57.21%), Postives = 148/215 (68.84%), Query Frame = 0
Query:    1 MMATPEKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPA-WVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYF 214
            M A  + S A+P D  P  LDG + GD GFDP GF+NNPP  W+ G   G+   +KWYREAE+ H RVAMLAA GWVFP IYHLPGN  +G D FA +NP  A   +P +G  QI  T+  +E  R+NR IR  D   GD+GLGQGEGRWNPFGFNY+EE+Y EKQLQE+KNGR+AM+ I G+  Q  V GK I+ QL  +F   +AVSKAGYYF
Sbjct:   78 MAADDDLSTALPFDKRPPNLDGSLPGDVGFDPVGFSNNPPRPWLIG---GSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANLNPFGALTTVPAAGLWQIAATVGAIELFRVNRVIRG-DKEAGDLGLGQGEGRWNPFGFNYSEEEYAEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGYYF 288          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A836CAI0_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI0_9STRA)

HSP 1 Score: 236 bits (601), Expect = 3.840e-75
Identity = 121/217 (55.76%), Postives = 149/217 (68.66%), Query Frame = 0
Query:    1 MMATPEKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPP-AWVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYFNP 216
            M    E+S AIP D  PE LDG +VGD GFDPAGF+NNPP AW+ G   G    +KWYREAE+ H R AMLAA GW+ PE  H PGN  +G D FA+ NP  A  ++P +G  QI  T+  +E  R+NR +R     PGD+GLGQG    NPFGFNYTEE+YK KQLQELKNGR+AM+AI GM+ Q+ +  + ++AQL+ AF+  DAV KAGYYF P
Sbjct:   32 MKMVSERSTAIPFDKRPENLDGSLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWIVPEFVHFPGNEQVGVDAFAKTNPWDALYSVPDAGLWQIAATIFAVEVFRINRVVRG-GAEPGDLGLGQGG--LNPFGFNYTEEEYKTKQLQELKNGRLAMVAIIGMFLQSAITNEGLIAQLSGAFTFPDAVGKAGYYFPP 242          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A835YWE6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE6_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.620e-73
Identity = 117/212 (55.19%), Postives = 149/212 (70.28%), Query Frame = 0
Query:    6 EKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPP-AWVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYFNP 216
            E+S AIP D  PE LDG +VGD GFDPAGF+NNPP AW+ G   G    +KWYREAE+ H R AMLAA GWV PE  H PGN  +G D FA+ NP  A  ++P +G  QI  T+  +E  R+NR +R  D  PGD+GLGQG    NPFGF+Y+EEQY+EKQLQE+KNGR+AM+AI GM+ Q  +  + ++++L+ AF+  DAV KAGY+F P
Sbjct:   34 ERSTAIPFDKRPENLDGTLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWVVPEFVHFPGNEAVGVDAFAKTNPWEALYSVPDAGLWQIAATIFAVEVYRINRVVRG-DKEPGDLGLGQGG--LNPFGFDYSEEQYREKQLQEIKNGRLAMVAIIGMFLQAAINQQGLISELSGAFTFPDAVGKAGYFFPP 239          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A0G4ELJ2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELJ2_VITBC)

HSP 1 Score: 214 bits (545), Expect = 1.940e-66
Identity = 107/201 (53.23%), Postives = 135/201 (67.16%), Query Frame = 0
Query:    2 MATPEKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANN-PPAWVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAF 201
            M   ++S+A+P+D  P  LDG + GDFGFDP GF+NN P  W+ G   G    +KWYREAEL H RVAMLAA GW+FPEI+HLPGN  +G D FAE NP  A   +P  G  QI  T+  +E  RL R +R  +   GD+GLGQGEGRWNPFGF + E++Y   Q++E+KNGR+AMIAI GM  Q  V G+ +L Q+ E F
Sbjct:   42 MGESDRSLALPMDKRPPNLDGSLPGDFGFDPVGFSNNLPRTWLIG---GDERSLKWYREAELVHSRVAMLAALGWIFPEIWHLPGNAAVGVDAFAETNPWKALTTVPKEGLWQIAGTVSAIEFFRLRRVVRG-EKEAGDLGLGQGEGRWNPFGFAFDEDEYYRMQVREIKNGRLAMIAIIGMMLQAAVTGEGLLEQIGEGF 238          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A6V1NAG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAG2_HETAK)

HSP 1 Score: 211 bits (536), Expect = 3.170e-65
Identity = 111/211 (52.61%), Postives = 137/211 (64.93%), Query Frame = 0
Query:    6 EKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPA-WVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPE-IYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYF 214
            E+S A+P+DPYPEGLDG M GD GFDPAGFANNPP  W+ G G  +   + WYREAELAH RVAMLA  GW FPE  YH PGN + G D FAE NP+ A    P  G IQI + +  +E  R+   IR  D  PGD+ LGQ  G  NPFG NY +++Y   +++E+K+GR+AM+ I GM FQ    G  +  QL  AF+  +AV  AGYYF
Sbjct:   40 ERSKALPMDPYPEGLDGTMAGDVGFDPAGFANNPPKKWLYGGGENS---LDWYREAELAHGRVAMLATVGWFFPETFYHFPGNEIYGQDIFAEANPIKALSVAPAGGLIQIALVIFFVEVWRIKNVIRG-DRAPGDLNLGQ-RGAINPFGLNYDDDEYFLMEVREIKHGRLAMLGIMGMIFQQAATGLSLGQQLGGAFTFPEAVKSAGYYF 245          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A0G4H236_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H236_9ALVE)

HSP 1 Score: 209 bits (533), Expect = 4.110e-64
Identity = 105/203 (51.72%), Postives = 131/203 (64.53%), Query Frame = 0
Query:    6 EKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANN-PPAWVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAV 207
            ++S+A+P D YP GLDG + GD+GFDPAGF NN P  W+ G   G    +KWYREAE+ H RVAMLA  GW+FPEI H  GN  +G D FAE+NPL A    P +G +QI   +  LE  R+ R I+  D   GD+GLGQGEGRWNPF FNY+ E+YK  Q +E+KNGR+AMI I  M  Q    G+ +L QL +    V  V
Sbjct:   96 DRSIALPFDKYPPGLDGTLAGDYGFDPAGFTNNLPRQWLIG---GEERSLKWYREAEITHARVAMLATLGWIFPEIAHFGGNAQVGQDAFAELNPLKAIYTAPAAGLVQIAFGIFALEYFRIKRVIQG-DAAAGDLGLGQGEGRWNPFKFNYSPEEYKTMQTREIKNGRLAMIGILAMIAQANASGEGLLTQLGQKAVGVSVV 294          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: F0Y1D8_AURAN (Uncharacterized protein LHC9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1D8_AURAN)

HSP 1 Score: 199 bits (505), Expect = 1.330e-60
Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 0
Query:   20 LDGEMVGDFGFDPAGFANNPP-AWVQG-EGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYYF 214
            LDG +VGD GFDP GF+   P AW QG EG G+   +K +REAEL H R+A LA  GW+FPE+YH PG      D FA+MNP  A D IP++G +QI   +  LE +R+NR +++P  +PGD+GLGQGEGRWNPFGF+YT E+Y +KQLQE+K+ R+AM+ I G+  ++      +L QL E+FS  + VSKAG+YF
Sbjct:   52 LDGSLVGDVGFDPLGFSKYAPGAWWQGDEGDGS---LKIFREAELMHGRIAQLACLGWIFPELYHFPGKD----DAFAKMNPYEAVDAIPSAGWLQILAFMSSLEILRVNR-LKDPAYIPGDLGLGQGEGRWNPFGFDYTAEEYYDKQLQEIKHSRLAMLGIAGLAAKSSGTDIGVLQQLGESFSRPEFVSKAGFYF 240          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A6S8TCV5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TCV5_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.360e-53
Identity = 103/210 (49.05%), Postives = 134/210 (63.81%), Query Frame = 0
Query:    8 SVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPA--WVQGEGTGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKP-ILAQLTEAFSPVDAVSKAGYYF 214
            SVA+P    P  LDG +VGD GFDP GF+   P   WV  EG G+   +K +REAEL H R+A LA  GWVFPEI H PG      + F +MNP  A D IP +G  QI   +   E  R+N+ +++P  +PGD GLGQG GRWNPFGFNYT E+Y+EKQLQE+K+ R+AM+ I G+  ++   G   +L Q+ E+FS  +  S AG+YF
Sbjct:   41 SVALPWTTTP--LDGSLVGDVGFDPLGFSKYAPGAWWVGDEGDGS---LKIFREAELMHGRIAQLACLGWVFPEIAHWPGKD----NAFGKMNPFDALDAIPKAGWYQILGFMVACEVWRINK-LKDPSYMPGDSGLGQGPGRWNPFGFNYTPEEYREKQLQEIKHCRLAMLGIVGLAAKSSGAGDVGVLQQVGESFSSPEYTSLAGFYF 240          
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Match: A0A7R9VTN0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTN0_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.060e-52
Identity = 96/211 (45.50%), Postives = 132/211 (62.56%), Query Frame = 0
Query:    8 SVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPA-WVQG-EG-TGTAARVKWYREAELAHCRVAMLAAAGWVFPEIYH-LPGNTVLGADRFAEMNPLLAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDG-VPGDIGLGQGEGRWNPFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEAFSPVDAVSKAGYY 213
            S A+P    P  LDG M+GD GFDP GF+  P   W  G EG  G    + WYREAEL H R+A +A  G++ P ++  LPGN  +G D ++  NPL AF  +P +  +QIF+ +  LE  R++       G +PGD+ +GQGEGRWNPFG  YTEEQY+EK+LQELK+ R+AMI I G++ Q L  G+ ++ QL    +  +  +KAGY+
Sbjct:   33 STALPFATAPATLDGSMLGDVGFDPLGFSTTPVGPWFAGLEGRNGVIGDLNWYREAELIHGRIAQVAVVGFIAPGLFGTLPGNAEVGFDAYSNTNPLEAFSQVPGAAILQIFLFMSALEFRRISIIREEGAGYMPGDLRIGQGEGRWNPFGLEYTEEQYEEKRLQELKHCRLAMIGIFGLWAQCLASGEGVVDQLGAGLTAPEYYAKAGYF 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR2_ECTSI6.100e-12981.57Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7TTD7_9STRA1.650e-7757.21Light-harvesting protein n=3 Tax=Monodopsidaceae T... [more]
A0A836CAI0_9STRA3.840e-7555.76Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A835YWE6_9STRA1.620e-7355.19Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A0G4ELJ2_VITBC1.940e-6653.23Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A6V1NAG2_HETAK3.170e-6552.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4H236_9ALVE4.110e-6451.72Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
F0Y1D8_AURAN1.330e-6052.79Uncharacterized protein LHC9 n=1 Tax=Aureococcus a... [more]
A0A6S8TCV5_9STRA2.360e-5349.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9VTN0_9STRA1.060e-5245.50Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 17..186
e-value: 2.4E-36
score: 125.7
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 6..211
e-value: 1.1E-48
score: 167.5
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 5..197
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 3..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:221445..225180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11771.1mRNA_P-fluviatile_contig54.11771.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 221343..227314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11771.1 ID=prot_P-fluviatile_contig54.11771.1|Name=mRNA_P-fluviatile_contig54.11771.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=218bp
MMATPEKSVAIPIDPYPEGLDGEMVGDFGFDPAGFANNPPAWVQGEGTGT
AARVKWYREAELAHCRVAMLAAAGWVFPEIYHLPGNTVLGADRFAEMNPL
LAFDNIPTSGNIQIFITLHILESIRLNRAIRNPDGVPGDIGLGQGEGRWN
PFGFNYTEEQYKEKQLQELKNGRVAMIAITGMYFQTLVQGKPILAQLTEA
FSPVDAVSKAGYYFNPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR001344Chloro_AB-bd_pln