prot_P-fluviatile_contig53.11732.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig53.11732.1
Unique Nameprot_P-fluviatile_contig53.11732.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length150
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig53.11732.1 vs. uniprot
Match: UPI001E8DDCE1 (uncharacterized protein LOC123957289 n=1 Tax=Micropterus dolomieu TaxID=147949 RepID=UPI001E8DDCE1)

HSP 1 Score: 54.3 bits (129), Expect = 1.010e-5
Identity = 37/128 (28.91%), Postives = 58/128 (45.31%), Query Frame = 0 
Query:   22 QRRANKLGGVNSLFFVLFLLRASTTLRVASTLFGVSESAGGREFASWLDLLANSLRPLVRLPDVDSVIPSAPPSFKWKQLFSMAVVLDATEFWVGKVWQSDAYRALWFQCNKRPTAKILRGSTRADAI 149
            Q+R   L   + L  VL  LR   + R  +  F VSES       SWL ++AN L+ +++ P   +V+ + P SF+ +       ++D TE ++ +     A    W       T K L G T A A+
Sbjct:  124 QKRTESLMLEDHLLVVLMKLRLGLSNRDIAYRFKVSESTVSNILRSWLPVMANILKSIIKWPSKGAVLKNMPKSFR-RHFKRCRCIIDCTEIFIERPTNLTARAQTWSNYKHHNTVKYLVGITPAGAV 250
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig53.11732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E8DDCE11.010e-528.91uncharacterized protein LOC123957289 n=1 Tax=Micro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027805Transposase, Helix-turn-helix domainPFAMPF13613HTH_Tnp_4coord: 32..77
e-value: 1.3E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig53contigP-fluviatile_contig53:975521..975970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig53.11732.1mRNA_P-fluviatile_contig53.11732.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig53 973912..976417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig53.11732.1 ID=prot_P-fluviatile_contig53.11732.1|Name=mRNA_P-fluviatile_contig53.11732.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=150bp
MNLYSPDEEQATGVKGDGRTKQRRANKLGGVNSLFFVLFLLRASTTLRVA
STLFGVSESAGGREFASWLDLLANSLRPLVRLPDVDSVIPSAPPSFKWKQ
LFSMAVVLDATEFWVGKVWQSDAYRALWFQCNKRPTAKILRGSTRADAI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027805Transposase_HTH_dom