prot_P-fluviatile_contig52.11649.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig52.11649.1
Unique Nameprot_P-fluviatile_contig52.11649.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length782
Homology
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BLAST of mRNA_P-fluviatile_contig52.11649.1 vs. uniprot
Match: A0A6H5KX53_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX53_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 9.990e-5
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0 
Query:  730 ASAMLLPSRKSGRRRVESDRMRGAKEDALFLKKQRL 765
            A+A++LPSRKSGRRR ESDR R AKEDA+F+KKQRL
Sbjct: 1085 ATAVVLPSRKSGRRRFESDRARDAKEDAIFIKKQRL 1120
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig52.11649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX53_9PHAE9.990e-577.78PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 439..466
NoneNo IPR availablePANTHERPTHR23261:SF22GROUND-LIKE (GRD RELATED)coord: 120..394
NoneNo IPR availablePANTHERPTHR23261GROUNDHOG-RELATEDcoord: 120..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig52contigP-fluviatile_contig52:1186104..1188449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig52.11649.1mRNA_P-fluviatile_contig52.11649.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig52 1186104..1188727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig52.11649.1 ID=prot_P-fluviatile_contig52.11649.1|Name=mRNA_P-fluviatile_contig52.11649.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=782bp
MRGTVGNSRRGSAEGRKQSLSQAAAAAAIPAVEKDEGKAGEKEKEDGEKE
PPGAETTDEPHAPGSAAKAGPAGEEEARENVGDADGAAFTEPAEDDAAAD
GGGRVKVEASAASSEEPTGGSVVGGGGADGGGRSRRMIPENVVSWCRSSL
SRRPPRHRSPPPPPLAESPQAMNPTAALAAADASCLTLSPAEAKERESDE
VAVNDAAAAAAAVMEGGKVEGKVADTTEAEATLQEQEENGQDSDVKEKAA
QGTPQNLSETGGAVSEPKEDENREDAKEETQRVSDNGDGRKGGIGGPSSE
ATTAAPGMEEAQGGVAASASAAAAAAAAAAAAADESGGGGDAGRREGDKE
EEEGGSDPQKTVTDAMDVEDEEEEGQEDMAEEGEDSRSDVARDRGGVASD
NNKESKSAPAAPEADGNVAEGDLNSCSDMDNDWEERRHVELDERERAQEK
EEKEVEEVEVDGEETETADDWEGEGQDEDSAEDGDGEGGLWIQQFQSAFQ
DGEHGGAMENEVVVQEAQPENEKDTEQHDDVGEISADASNTNGGGGEDIV
PPAAPSRVTSDANVGAARVETSVASDAEASASTEGGGAAVDVPPQPERPV
EAAADADAAGEGGGPGSEAGADGEADVNVGMCIDTAVPSGTAAPVSAGGG
GGDGSGSDGGKPAATTDRIPPATLERHPAAQCEGQQQRVVEVAAGDGAGT
GVEAAAVATPVSAAAPAPAPVAAPPERPRASAMLLPSRKSGRRRVESDRM
RGAKEDALFLKKQRLSIGGVGNRTGGGGGRGG
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