prot_P-fluviatile_contig52.11641.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig52.11641.1
Unique Nameprot_P-fluviatile_contig52.11641.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length191
Homology
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BLAST of mRNA_P-fluviatile_contig52.11641.1 vs. uniprot
Match: D8LS14_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS14_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 4.030e-64
Identity = 112/185 (60.54%), Postives = 131/185 (70.81%), Query Frame = 0 
Query:    1 MARSLFLLLALPIAVSAWR-CSLEPSVSYSGRGASKRPRPVWTSTLECCDGMYNREHARRSYVARGSGDDYAGPGGYGAEDAGKKKQEWPTDGRENLPFEVFDAAPPPRKVGVANLPPSTGTGDTLWHGAKHYKVLRVSNHYKYEGGRFVVQRKSIEAKELKRVAKERVVSRLVYGDGGRTPSLP 184
            MA S  LLL LP+A S W    + P     G    KRPRP W S++   D   +R     ++++  SGDD +   G G   +G K  EW  DGR++LPF V+DAAPPPRKVGVANLPP TGTGDTLWHG+KHYKVLRVS+HYKYEGGRFVV+RKSI+AKELKRVAKERVVSRLVYGD G+ P  P
Sbjct:    1 MALSFLLLLVLPMAASGWHHVGVHP-----GSFRYKRPRPAWASSVRQGDSSGDR-----AWMSASSGDDSSSGSGSGLSGSGGK--EWVDDGRDSLPFVVYDAAPPPRKVGVANLPPLTGTGDTLWHGSKHYKVLRVSSHYKYEGGRFVVRRKSIQAKELKRVAKERVVSRLVYGDSGKAPPPP 173
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BLAST of mRNA_P-fluviatile_contig52.11641.1 vs. uniprot
Match: A0A836CEA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA4_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.470e-18
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:   82 GKKKQEW-PTDGRENLPFEVFDAAPPPRKVGVANLPPSTGTGDTLWHGAKHYKVLRVSNHYKYEGGRFVVQRKSIEAKELKRVAKERVVSRL 172
            GK+ +E+ P D R+ LP++V++A+PP RK+G   L P+TG GD + HG K Y V +VS HY++EGG F + RK  +A EL R A ER+ +R+
Sbjct:   71 GKQYKEYKPRDDRDRLPYDVYNASPPRRKLGRFALDPTTGCGDMIQHGMKSYVVGKVSCHYRFEGGAFKMFRKEADATELLRAAAERIAARM 162
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BLAST of mRNA_P-fluviatile_contig52.11641.1 vs. uniprot
Match: A0A836CD29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD29_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.510e-9
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:   96 LPFEVFDAAPPPRKVGVANLPPSTGTGDTLWHGAKHYKVLRVSNHYKYEGGRFVVQRKSIEAKELKRVAKERVVSRLVYGDGGRTPSLP 184
            LP++V++A+PP RK+G   L  +TG GD + HG K Y V R      +EGG F + RK  +A EL R A ER+V+R+      +TP  P
Sbjct:  165 LPYDVYNASPPRRKLGRFALDLTTGCGDMILHGMKSYVVGR------FEGGAFKMFRKEADATELLRAAAERIVARMA-----KTPDEP 242
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig52.11641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS14_ECTSI4.030e-6460.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEA4_9STRA1.470e-1847.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD29_9STRA4.510e-942.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig52contigP-fluviatile_contig52:1120414..1124044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig52.11641.1mRNA_P-fluviatile_contig52.11641.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig52 1120386..1124461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig52.11641.1 ID=prot_P-fluviatile_contig52.11641.1|Name=mRNA_P-fluviatile_contig52.11641.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=191bp
MARSLFLLLALPIAVSAWRCSLEPSVSYSGRGASKRPRPVWTSTLECCDG
MYNREHARRSYVARGSGDDYAGPGGYGAEDAGKKKQEWPTDGRENLPFEV
FDAAPPPRKVGVANLPPSTGTGDTLWHGAKHYKVLRVSNHYKYEGGRFVV
QRKSIEAKELKRVAKERVVSRLVYGDGGRTPSLPPSPPSA*
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